Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
PCDHGB4Q9UN71 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
PCDHGB4Q9UN71 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
PCDHGB4Q9UN71 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGB4Q9UN71 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.84■■□□□ 1.09
PCDHGB4Q9UN71 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGB4Q9UN71 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGB4Q9UN71 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.09
PCDHGB4Q9UN71 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGB4Q9UN71 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.83■■□□□ 1.09
PCDHGB4Q9UN71 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.83■■□□□ 1.09
PCDHGB4Q9UN71 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.83■■□□□ 1.09
PCDHGB4Q9UN71 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
PCDHGB4Q9UN71 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHGB4Q9UN71 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.83■■□□□ 1.08
PCDHGB4Q9UN71 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHGB4Q9UN71 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHGB4Q9UN71 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHGB4Q9UN71 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHGB4Q9UN71 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGB4Q9UN71 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGB4Q9UN71 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
PCDHGB4Q9UN71 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGB4Q9UN71 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
PCDHGB4Q9UN71 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGB4Q9UN71 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGB4Q9UN71 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGB4Q9UN71 AC129492.7-201ENST00000622992 756 ntBASIC21.81■■□□□ 1.08
PCDHGB4Q9UN71 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGB4Q9UN71 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGB4Q9UN71 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
PCDHGB4Q9UN71 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGB4Q9UN71 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGB4Q9UN71 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGB4Q9UN71 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PCDHGB4Q9UN71 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGB4Q9UN71 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGB4Q9UN71 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGB4Q9UN71 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGB4Q9UN71 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGB4Q9UN71 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGB4Q9UN71 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGB4Q9UN71 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGB4Q9UN71 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.79■■□□□ 1.08
PCDHGB4Q9UN71 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHGB4Q9UN71 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGB4Q9UN71 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGB4Q9UN71 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGB4Q9UN71 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGB4Q9UN71 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PCDHGB4Q9UN71 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGB4Q9UN71 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDHGB4Q9UN71 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGB4Q9UN71 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
PCDHGB4Q9UN71 LONRF2P2-201ENST00000439212 571 ntBASIC21.79■■□□□ 1.08
PCDHGB4Q9UN71 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGB4Q9UN71 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGB4Q9UN71 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
PCDHGB4Q9UN71 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGB4Q9UN71 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGB4Q9UN71 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDHGB4Q9UN71 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDHGB4Q9UN71 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHGB4Q9UN71 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDHGB4Q9UN71 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGB4Q9UN71 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHGB4Q9UN71 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGB4Q9UN71 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHGB4Q9UN71 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGB4Q9UN71 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGB4Q9UN71 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.77■■□□□ 1.08
PCDHGB4Q9UN71 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
PCDHGB4Q9UN71 AC007375.3-201ENST00000600936 2314 ntBASIC21.77■■□□□ 1.08
PCDHGB4Q9UN71 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDHGB4Q9UN71 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGB4Q9UN71 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDHGB4Q9UN71 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGB4Q9UN71 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGB4Q9UN71 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHGB4Q9UN71 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PCDHGB4Q9UN71 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGB4Q9UN71 KRT18P60-201ENST00000312876 1297 ntBASIC21.76■■□□□ 1.07
PCDHGB4Q9UN71 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.76■■□□□ 1.07
PCDHGB4Q9UN71 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHGB4Q9UN71 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHGB4Q9UN71 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.76■■□□□ 1.07
PCDHGB4Q9UN71 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHGB4Q9UN71 AL161729.1-201ENST00000604104 1402 ntBASIC21.76■■□□□ 1.07
PCDHGB4Q9UN71 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGB4Q9UN71 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.76■■□□□ 1.07
PCDHGB4Q9UN71 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGB4Q9UN71 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGB4Q9UN71 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGB4Q9UN71 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGB4Q9UN71 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGB4Q9UN71 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHGB4Q9UN71 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHGB4Q9UN71 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGB4Q9UN71 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGB4Q9UN71 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms