Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 AC010997.5-201ENST00000609182 354 ntBASIC20.87■□□□□ 0.93
UBQLN4Q9NRR5 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.87■□□□□ 0.93
UBQLN4Q9NRR5 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.87■□□□□ 0.93
UBQLN4Q9NRR5 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
UBQLN4Q9NRR5 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBQLN4Q9NRR5 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBQLN4Q9NRR5 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBQLN4Q9NRR5 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBQLN4Q9NRR5 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
UBQLN4Q9NRR5 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.86■□□□□ 0.93
UBQLN4Q9NRR5 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBQLN4Q9NRR5 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBQLN4Q9NRR5 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
UBQLN4Q9NRR5 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBQLN4Q9NRR5 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.85■□□□□ 0.93
UBQLN4Q9NRR5 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBQLN4Q9NRR5 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
UBQLN4Q9NRR5 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.85■□□□□ 0.93
UBQLN4Q9NRR5 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.85■□□□□ 0.93
UBQLN4Q9NRR5 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.85■□□□□ 0.93
UBQLN4Q9NRR5 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.85■□□□□ 0.93
UBQLN4Q9NRR5 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBQLN4Q9NRR5 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBQLN4Q9NRR5 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
UBQLN4Q9NRR5 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
UBQLN4Q9NRR5 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.84■□□□□ 0.93
UBQLN4Q9NRR5 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBQLN4Q9NRR5 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
UBQLN4Q9NRR5 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
UBQLN4Q9NRR5 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.84■□□□□ 0.93
UBQLN4Q9NRR5 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.84■□□□□ 0.93
UBQLN4Q9NRR5 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
UBQLN4Q9NRR5 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBQLN4Q9NRR5 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBQLN4Q9NRR5 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBQLN4Q9NRR5 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBQLN4Q9NRR5 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.83■□□□□ 0.93
UBQLN4Q9NRR5 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBQLN4Q9NRR5 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
UBQLN4Q9NRR5 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBQLN4Q9NRR5 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBQLN4Q9NRR5 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
UBQLN4Q9NRR5 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.83■□□□□ 0.93
UBQLN4Q9NRR5 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBQLN4Q9NRR5 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
UBQLN4Q9NRR5 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
UBQLN4Q9NRR5 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBQLN4Q9NRR5 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBQLN4Q9NRR5 GUSBP5-201ENST00000418136 578 ntBASIC20.82■□□□□ 0.92
UBQLN4Q9NRR5 UNC93B8-201ENST00000511903 705 ntBASIC20.82■□□□□ 0.92
UBQLN4Q9NRR5 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.82■□□□□ 0.92
UBQLN4Q9NRR5 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
UBQLN4Q9NRR5 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
UBQLN4Q9NRR5 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
UBQLN4Q9NRR5 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
UBQLN4Q9NRR5 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBQLN4Q9NRR5 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
UBQLN4Q9NRR5 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBQLN4Q9NRR5 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.81■□□□□ 0.92
UBQLN4Q9NRR5 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBQLN4Q9NRR5 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
UBQLN4Q9NRR5 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBQLN4Q9NRR5 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
UBQLN4Q9NRR5 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBQLN4Q9NRR5 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
UBQLN4Q9NRR5 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBQLN4Q9NRR5 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBQLN4Q9NRR5 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBQLN4Q9NRR5 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
UBQLN4Q9NRR5 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.8■□□□□ 0.92
UBQLN4Q9NRR5 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBQLN4Q9NRR5 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.8■□□□□ 0.92
UBQLN4Q9NRR5 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
UBQLN4Q9NRR5 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.8■□□□□ 0.92
UBQLN4Q9NRR5 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBQLN4Q9NRR5 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.79■□□□□ 0.92
UBQLN4Q9NRR5 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
UBQLN4Q9NRR5 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.79■□□□□ 0.92
UBQLN4Q9NRR5 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBQLN4Q9NRR5 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
UBQLN4Q9NRR5 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
UBQLN4Q9NRR5 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.79■□□□□ 0.92
UBQLN4Q9NRR5 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBQLN4Q9NRR5 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.79■□□□□ 0.92
UBQLN4Q9NRR5 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.78■□□□□ 0.92
UBQLN4Q9NRR5 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBQLN4Q9NRR5 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UBQLN4Q9NRR5 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBQLN4Q9NRR5 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBQLN4Q9NRR5 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBQLN4Q9NRR5 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBQLN4Q9NRR5 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBQLN4Q9NRR5 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
UBQLN4Q9NRR5 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
UBQLN4Q9NRR5 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.78■□□□□ 0.92
UBQLN4Q9NRR5 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBQLN4Q9NRR5 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
UBQLN4Q9NRR5 ANOS2P-203ENST00000472227 1816 ntBASIC20.78■□□□□ 0.92
UBQLN4Q9NRR5 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBQLN4Q9NRR5 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms