Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.12■□□□□ 0.65
ALX4Q9H161 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ALX4Q9H161 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
ALX4Q9H161 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ALX4Q9H161 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.12■□□□□ 0.65
ALX4Q9H161 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.12■□□□□ 0.65
ALX4Q9H161 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
ALX4Q9H161 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.12■□□□□ 0.65
ALX4Q9H161 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.12■□□□□ 0.65
ALX4Q9H161 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ALX4Q9H161 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
ALX4Q9H161 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.11■□□□□ 0.65
ALX4Q9H161 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ALX4Q9H161 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ALX4Q9H161 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
ALX4Q9H161 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ALX4Q9H161 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ALX4Q9H161 ECEL1P2-201ENST00000461596 1295 ntBASIC19.11■□□□□ 0.65
ALX4Q9H161 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ALX4Q9H161 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.11■□□□□ 0.65
ALX4Q9H161 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ALX4Q9H161 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ALX4Q9H161 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ALX4Q9H161 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ALX4Q9H161 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ALX4Q9H161 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ALX4Q9H161 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
ALX4Q9H161 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ALX4Q9H161 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ALX4Q9H161 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ALX4Q9H161 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ALX4Q9H161 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
ALX4Q9H161 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
ALX4Q9H161 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ALX4Q9H161 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
ALX4Q9H161 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.1■□□□□ 0.65
ALX4Q9H161 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ALX4Q9H161 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
ALX4Q9H161 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ALX4Q9H161 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
ALX4Q9H161 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.09■□□□□ 0.65
ALX4Q9H161 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.09■□□□□ 0.65
ALX4Q9H161 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
ALX4Q9H161 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ALX4Q9H161 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ALX4Q9H161 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.09■□□□□ 0.65
ALX4Q9H161 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.09■□□□□ 0.65
ALX4Q9H161 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ALX4Q9H161 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ALX4Q9H161 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ALX4Q9H161 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ALX4Q9H161 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.08■□□□□ 0.64
ALX4Q9H161 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.08■□□□□ 0.64
ALX4Q9H161 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ALX4Q9H161 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.08■□□□□ 0.64
ALX4Q9H161 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.08■□□□□ 0.64
ALX4Q9H161 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.08■□□□□ 0.64
ALX4Q9H161 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.07■□□□□ 0.64
ALX4Q9H161 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.07■□□□□ 0.64
ALX4Q9H161 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ALX4Q9H161 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ALX4Q9H161 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ALX4Q9H161 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.07■□□□□ 0.64
ALX4Q9H161 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ALX4Q9H161 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
ALX4Q9H161 ABHD17AP5-201ENST00000580133 923 ntBASIC19.07■□□□□ 0.64
ALX4Q9H161 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ALX4Q9H161 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ALX4Q9H161 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ALX4Q9H161 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ALX4Q9H161 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ALX4Q9H161 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ALX4Q9H161 AL137060.1-201ENST00000618151 2648 ntBASIC19.06■□□□□ 0.64
ALX4Q9H161 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ALX4Q9H161 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.06■□□□□ 0.64
ALX4Q9H161 SMPD5-203ENST00000639008 1464 ntBASIC19.06■□□□□ 0.64
ALX4Q9H161 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.06■□□□□ 0.64
ALX4Q9H161 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ALX4Q9H161 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ALX4Q9H161 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ALX4Q9H161 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.06■□□□□ 0.64
ALX4Q9H161 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
ALX4Q9H161 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.06■□□□□ 0.64
ALX4Q9H161 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ALX4Q9H161 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
ALX4Q9H161 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ALX4Q9H161 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
ALX4Q9H161 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ALX4Q9H161 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
ALX4Q9H161 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ALX4Q9H161 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.05■□□□□ 0.64
ALX4Q9H161 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
ALX4Q9H161 AL161729.1-201ENST00000604104 1402 ntBASIC19.05■□□□□ 0.64
ALX4Q9H161 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
ALX4Q9H161 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ALX4Q9H161 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
ALX4Q9H161 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ALX4Q9H161 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ALX4Q9H161 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ALX4Q9H161 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms