Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
PCDH20Q8N6Y1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.14■■□□□ 1.29
PCDH20Q8N6Y1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.14■■□□□ 1.29
PCDH20Q8N6Y1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.14■■□□□ 1.29
PCDH20Q8N6Y1 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDH20Q8N6Y1 ALDH1A3-203ENST00000557963 1670 ntBASIC23.13■■□□□ 1.29
PCDH20Q8N6Y1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
PCDH20Q8N6Y1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDH20Q8N6Y1 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.13■■□□□ 1.29
PCDH20Q8N6Y1 MIR4466-201ENST00000606121 54 ntBASIC23.13■■□□□ 1.29
PCDH20Q8N6Y1 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.13■■□□□ 1.29
PCDH20Q8N6Y1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDH20Q8N6Y1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDH20Q8N6Y1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PCDH20Q8N6Y1 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.12■■□□□ 1.29
PCDH20Q8N6Y1 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDH20Q8N6Y1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDH20Q8N6Y1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
PCDH20Q8N6Y1 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDH20Q8N6Y1 AL136116.3-201ENST00000402907 1138 ntBASIC23.12■■□□□ 1.29
PCDH20Q8N6Y1 AC141586.4-201ENST00000624558 1573 ntBASIC23.12■■□□□ 1.29
PCDH20Q8N6Y1 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.12■■□□□ 1.29
PCDH20Q8N6Y1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
PCDH20Q8N6Y1 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDH20Q8N6Y1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDH20Q8N6Y1 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PCDH20Q8N6Y1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDH20Q8N6Y1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PCDH20Q8N6Y1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.11■■□□□ 1.29
PCDH20Q8N6Y1 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDH20Q8N6Y1 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDH20Q8N6Y1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.11■■□□□ 1.29
PCDH20Q8N6Y1 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDH20Q8N6Y1 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDH20Q8N6Y1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDH20Q8N6Y1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
PCDH20Q8N6Y1 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDH20Q8N6Y1 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDH20Q8N6Y1 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDH20Q8N6Y1 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDH20Q8N6Y1 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDH20Q8N6Y1 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH20Q8N6Y1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH20Q8N6Y1 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH20Q8N6Y1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.09■■□□□ 1.29
PCDH20Q8N6Y1 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH20Q8N6Y1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH20Q8N6Y1 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH20Q8N6Y1 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.29
PCDH20Q8N6Y1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDH20Q8N6Y1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDH20Q8N6Y1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.08■■□□□ 1.29
PCDH20Q8N6Y1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.08■■□□□ 1.29
PCDH20Q8N6Y1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PCDH20Q8N6Y1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.08■■□□□ 1.29
PCDH20Q8N6Y1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.08■■□□□ 1.28
PCDH20Q8N6Y1 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.07■■□□□ 1.28
PCDH20Q8N6Y1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH20Q8N6Y1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH20Q8N6Y1 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH20Q8N6Y1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.07■■□□□ 1.28
PCDH20Q8N6Y1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
PCDH20Q8N6Y1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.07■■□□□ 1.28
PCDH20Q8N6Y1 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH20Q8N6Y1 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.07■■□□□ 1.28
PCDH20Q8N6Y1 LINC00543-201ENST00000567234 1845 ntBASIC23.07■■□□□ 1.28
PCDH20Q8N6Y1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH20Q8N6Y1 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH20Q8N6Y1 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.06■■□□□ 1.28
PCDH20Q8N6Y1 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
PCDH20Q8N6Y1 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
PCDH20Q8N6Y1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.06■■□□□ 1.28
PCDH20Q8N6Y1 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDH20Q8N6Y1 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
PCDH20Q8N6Y1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDH20Q8N6Y1 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.06■■□□□ 1.28
PCDH20Q8N6Y1 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDH20Q8N6Y1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDH20Q8N6Y1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDH20Q8N6Y1 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDH20Q8N6Y1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH20Q8N6Y1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH20Q8N6Y1 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH20Q8N6Y1 LINC01124-201ENST00000409786 2117 ntBASIC23.05■■□□□ 1.28
PCDH20Q8N6Y1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
PCDH20Q8N6Y1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH20Q8N6Y1 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH20Q8N6Y1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH20Q8N6Y1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.05■■□□□ 1.28
PCDH20Q8N6Y1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH20Q8N6Y1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH20Q8N6Y1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.05■■□□□ 1.28
PCDH20Q8N6Y1 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH20Q8N6Y1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDH20Q8N6Y1 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDH20Q8N6Y1 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDH20Q8N6Y1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PCDH20Q8N6Y1 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PCDH20Q8N6Y1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDH20Q8N6Y1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms