Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CD4P01730 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
CD4P01730 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CD4P01730 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC25.23■■□□□ 1.63
CD4P01730 AC009086.3-201ENST00000623486 1008 ntBASIC25.23■■□□□ 1.63
CD4P01730 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
CD4P01730 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC25.22■■□□□ 1.63
CD4P01730 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC25.22■■□□□ 1.63
CD4P01730 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CD4P01730 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
CD4P01730 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC25.22■■□□□ 1.63
CD4P01730 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC25.22■■□□□ 1.63
CD4P01730 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC25.22■■□□□ 1.63
CD4P01730 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC25.22■■□□□ 1.63
CD4P01730 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CD4P01730 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CD4P01730 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC25.22■■□□□ 1.63
CD4P01730 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CD4P01730 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC25.22■■□□□ 1.63
CD4P01730 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC25.22■■□□□ 1.63
CD4P01730 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.21■■□□□ 1.63
CD4P01730 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC25.21■■□□□ 1.63
CD4P01730 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CD4P01730 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CD4P01730 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CD4P01730 KRT18P5-201ENST00000436075 1291 ntBASIC25.21■■□□□ 1.63
CD4P01730 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.21■■□□□ 1.63
CD4P01730 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.21■■□□□ 1.63
CD4P01730 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CD4P01730 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.63
CD4P01730 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.2■■□□□ 1.63
CD4P01730 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CD4P01730 MIR6089-201ENST00000616698 64 ntBASIC25.2■■□□□ 1.62
CD4P01730 AL031602.1-201ENST00000633169 911 ntBASIC25.2■■□□□ 1.62
CD4P01730 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CD4P01730 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC25.2■■□□□ 1.62
CD4P01730 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
CD4P01730 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
CD4P01730 VGF-203ENST00000611537 1622 ntTSL 5 BASIC25.19■■□□□ 1.62
CD4P01730 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
CD4P01730 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC25.19■■□□□ 1.62
CD4P01730 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC25.19■■□□□ 1.62
CD4P01730 YBX1P1-201ENST00000445822 960 ntBASIC25.19■■□□□ 1.62
CD4P01730 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
CD4P01730 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC25.18■■□□□ 1.62
CD4P01730 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC25.18■■□□□ 1.62
CD4P01730 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC25.18■■□□□ 1.62
CD4P01730 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
CD4P01730 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CD4P01730 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CD4P01730 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CD4P01730 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
CD4P01730 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC25.17■■□□□ 1.62
CD4P01730 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
CD4P01730 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CD4P01730 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
CD4P01730 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CD4P01730 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CD4P01730 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC25.16■■□□□ 1.62
CD4P01730 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC25.16■■□□□ 1.62
CD4P01730 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC25.16■■□□□ 1.62
CD4P01730 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC25.16■■□□□ 1.62
CD4P01730 AL137784.2-201ENST00000607332 1000 ntBASIC25.16■■□□□ 1.62
CD4P01730 NKILA-201ENST00000613231 537 ntTSL 4 BASIC25.16■■□□□ 1.62
CD4P01730 AC092437.1-201ENST00000624794 1048 ntBASIC25.16■■□□□ 1.62
CD4P01730 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CD4P01730 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.15■■□□□ 1.62
CD4P01730 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC25.15■■□□□ 1.62
CD4P01730 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CD4P01730 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CD4P01730 DUX4L2-201ENST00000561772 1275 ntBASIC25.15■■□□□ 1.62
CD4P01730 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC25.15■■□□□ 1.62
CD4P01730 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC25.15■■□□□ 1.62
CD4P01730 DUX4L6-201ENST00000626483 1275 ntBASIC25.15■■□□□ 1.62
CD4P01730 DUX4L1-201ENST00000627662 1275 ntBASIC25.15■■□□□ 1.62
CD4P01730 DUX4L8-201ENST00000629013 1275 ntBASIC25.15■■□□□ 1.62
CD4P01730 DUX4L3-201ENST00000630187 1275 ntBASIC25.15■■□□□ 1.62
CD4P01730 DUX4L7-201ENST00000630678 1275 ntBASIC25.15■■□□□ 1.62
CD4P01730 DUX4L5-201ENST00000630834 1275 ntBASIC25.15■■□□□ 1.62
CD4P01730 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CD4P01730 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
CD4P01730 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
CD4P01730 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CD4P01730 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CD4P01730 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC25.14■■□□□ 1.62
CD4P01730 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CD4P01730 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CD4P01730 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.61
CD4P01730 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CD4P01730 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
CD4P01730 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
CD4P01730 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC25.13■■□□□ 1.61
CD4P01730 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CD4P01730 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.13■■□□□ 1.61
CD4P01730 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CD4P01730 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
CD4P01730 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC25.13■■□□□ 1.61
CD4P01730 AC126544.1-201ENST00000580842 1059 ntBASIC25.13■■□□□ 1.61
CD4P01730 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC25.13■■□□□ 1.61
CD4P01730 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms