Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV1-2A0A0B4J238 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV1-2A0A0B4J238 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TRAV1-2A0A0B4J238 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV1-2A0A0B4J238 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV1-2A0A0B4J238 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV1-2A0A0B4J238 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV1-2A0A0B4J238 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV1-2A0A0B4J238 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAV1-2A0A0B4J238 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.78■□□□□ 0.76
TRAV1-2A0A0B4J238 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.78■□□□□ 0.76
TRAV1-2A0A0B4J238 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV1-2A0A0B4J238 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
TRAV1-2A0A0B4J238 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV1-2A0A0B4J238 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.77■□□□□ 0.76
TRAV1-2A0A0B4J238 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
TRAV1-2A0A0B4J238 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV1-2A0A0B4J238 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TRAV1-2A0A0B4J238 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV1-2A0A0B4J238 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TRAV1-2A0A0B4J238 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV1-2A0A0B4J238 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.76■□□□□ 0.75
TRAV1-2A0A0B4J238 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV1-2A0A0B4J238 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV1-2A0A0B4J238 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV1-2A0A0B4J238 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV1-2A0A0B4J238 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TRAV1-2A0A0B4J238 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV1-2A0A0B4J238 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TRAV1-2A0A0B4J238 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TRAV1-2A0A0B4J238 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.75■□□□□ 0.75
TRAV1-2A0A0B4J238 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV1-2A0A0B4J238 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV1-2A0A0B4J238 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TRAV1-2A0A0B4J238 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
TRAV1-2A0A0B4J238 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.75■□□□□ 0.75
TRAV1-2A0A0B4J238 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV1-2A0A0B4J238 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.75■□□□□ 0.75
TRAV1-2A0A0B4J238 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV1-2A0A0B4J238 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV1-2A0A0B4J238 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV1-2A0A0B4J238 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.74■□□□□ 0.75
TRAV1-2A0A0B4J238 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV1-2A0A0B4J238 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
TRAV1-2A0A0B4J238 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV1-2A0A0B4J238 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.74■□□□□ 0.75
TRAV1-2A0A0B4J238 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV1-2A0A0B4J238 AL022069.1-201ENST00000568025 1636 ntBASIC19.74■□□□□ 0.75
TRAV1-2A0A0B4J238 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV1-2A0A0B4J238 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV1-2A0A0B4J238 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV1-2A0A0B4J238 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.74■□□□□ 0.75
TRAV1-2A0A0B4J238 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV1-2A0A0B4J238 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV1-2A0A0B4J238 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.74■□□□□ 0.75
TRAV1-2A0A0B4J238 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV1-2A0A0B4J238 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV1-2A0A0B4J238 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV1-2A0A0B4J238 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV1-2A0A0B4J238 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV1-2A0A0B4J238 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV1-2A0A0B4J238 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV1-2A0A0B4J238 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV1-2A0A0B4J238 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV1-2A0A0B4J238 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV1-2A0A0B4J238 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.73■□□□□ 0.75
TRAV1-2A0A0B4J238 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
TRAV1-2A0A0B4J238 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.73■□□□□ 0.75
TRAV1-2A0A0B4J238 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV1-2A0A0B4J238 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV1-2A0A0B4J238 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV1-2A0A0B4J238 AC007375.3-201ENST00000600936 2314 ntBASIC19.73■□□□□ 0.75
TRAV1-2A0A0B4J238 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV1-2A0A0B4J238 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TRAV1-2A0A0B4J238 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV1-2A0A0B4J238 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV1-2A0A0B4J238 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV1-2A0A0B4J238 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV1-2A0A0B4J238 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV1-2A0A0B4J238 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV1-2A0A0B4J238 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
TRAV1-2A0A0B4J238 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.71■□□□□ 0.75
TRAV1-2A0A0B4J238 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TRAV1-2A0A0B4J238 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TRAV1-2A0A0B4J238 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.71■□□□□ 0.75
TRAV1-2A0A0B4J238 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV1-2A0A0B4J238 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV1-2A0A0B4J238 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.71■□□□□ 0.75
TRAV1-2A0A0B4J238 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV1-2A0A0B4J238 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV1-2A0A0B4J238 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV1-2A0A0B4J238 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV1-2A0A0B4J238 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV1-2A0A0B4J238 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.71■□□□□ 0.75
TRAV1-2A0A0B4J238 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
TRAV1-2A0A0B4J238 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV1-2A0A0B4J238 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.7■□□□□ 0.74
TRAV1-2A0A0B4J238 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV1-2A0A0B4J238 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV1-2A0A0B4J238 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms