Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC15.6■□□□□ 0.09
BEST2Q8NFU1 AP001267.2-201ENST00000532619 2086 ntBASIC15.59■□□□□ 0.09
BEST2Q8NFU1 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 AC090505.1-201ENST00000430515 1834 ntBASIC15.59■□□□□ 0.09
BEST2Q8NFU1 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 AC104506.1-201ENST00000609247 429 ntBASIC15.59■□□□□ 0.09
BEST2Q8NFU1 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 AF254983.2-201ENST00000612331 135 ntBASIC15.59■□□□□ 0.09
BEST2Q8NFU1 AC090386.2-201ENST00000623010 1039 ntBASIC15.59■□□□□ 0.09
BEST2Q8NFU1 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 AC011498.7-201ENST00000624986 2027 ntBASIC15.59■□□□□ 0.09
BEST2Q8NFU1 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 FRMPD2B-201ENST00000431305 1347 ntBASIC15.59■□□□□ 0.09
BEST2Q8NFU1 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.59■□□□□ 0.09
BEST2Q8NFU1 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.58■□□□□ 0.09
BEST2Q8NFU1 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
BEST2Q8NFU1 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.58■□□□□ 0.09
BEST2Q8NFU1 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
BEST2Q8NFU1 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.58■□□□□ 0.09
BEST2Q8NFU1 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
BEST2Q8NFU1 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.58■□□□□ 0.09
BEST2Q8NFU1 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
BEST2Q8NFU1 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.58■□□□□ 0.09
BEST2Q8NFU1 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.58■□□□□ 0.08
BEST2Q8NFU1 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
BEST2Q8NFU1 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.58■□□□□ 0.08
BEST2Q8NFU1 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
BEST2Q8NFU1 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
BEST2Q8NFU1 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC15.58■□□□□ 0.08
BEST2Q8NFU1 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.58■□□□□ 0.08
BEST2Q8NFU1 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.58■□□□□ 0.08
BEST2Q8NFU1 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC15.58■□□□□ 0.08
BEST2Q8NFU1 AL353637.1-201ENST00000451571 732 ntBASIC15.58■□□□□ 0.08
BEST2Q8NFU1 SUPT4H1P2-201ENST00000501248 353 ntBASIC15.58■□□□□ 0.08
BEST2Q8NFU1 NUP210P1-202ENST00000504322 710 ntBASIC15.58■□□□□ 0.08
BEST2Q8NFU1 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC15.58■□□□□ 0.08
BEST2Q8NFU1 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC15.58■□□□□ 0.08
BEST2Q8NFU1 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.58■□□□□ 0.08
BEST2Q8NFU1 IRF3-215ENST00000596822 823 ntTSL 3 BASIC15.58■□□□□ 0.08
BEST2Q8NFU1 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC15.58■□□□□ 0.08
BEST2Q8NFU1 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
BEST2Q8NFU1 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
BEST2Q8NFU1 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
BEST2Q8NFU1 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
BEST2Q8NFU1 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC15.58■□□□□ 0.08
BEST2Q8NFU1 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.58■□□□□ 0.08
BEST2Q8NFU1 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
BEST2Q8NFU1 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
BEST2Q8NFU1 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
BEST2Q8NFU1 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
BEST2Q8NFU1 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
BEST2Q8NFU1 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
BEST2Q8NFU1 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
BEST2Q8NFU1 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
BEST2Q8NFU1 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.58■□□□□ 0.08
BEST2Q8NFU1 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
BEST2Q8NFU1 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
BEST2Q8NFU1 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
BEST2Q8NFU1 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BEST2Q8NFU1 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms