Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42BPAQ5VT25 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42BPAQ5VT25 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42BPAQ5VT25 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC21.17■□□□□ 0.98
CDC42BPAQ5VT25 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CDC42BPAQ5VT25 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC21.17■□□□□ 0.98
CDC42BPAQ5VT25 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC21.17■□□□□ 0.98
CDC42BPAQ5VT25 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC21.17■□□□□ 0.98
CDC42BPAQ5VT25 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC21.17■□□□□ 0.98
CDC42BPAQ5VT25 AC011462.4-201ENST00000616866 449 ntBASIC21.17■□□□□ 0.98
CDC42BPAQ5VT25 FUK-207ENST00000571514 3054 ntTSL 2 BASIC21.17■□□□□ 0.98
CDC42BPAQ5VT25 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42BPAQ5VT25 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC21.17■□□□□ 0.98
CDC42BPAQ5VT25 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42BPAQ5VT25 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC21.17■□□□□ 0.98
CDC42BPAQ5VT25 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC21.17■□□□□ 0.98
CDC42BPAQ5VT25 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC21.17■□□□□ 0.98
CDC42BPAQ5VT25 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDC42BPAQ5VT25 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDC42BPAQ5VT25 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDC42BPAQ5VT25 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CDC42BPAQ5VT25 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC21.16■□□□□ 0.98
CDC42BPAQ5VT25 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CDC42BPAQ5VT25 AC113347.2-201ENST00000512350 279 ntBASIC21.16■□□□□ 0.98
CDC42BPAQ5VT25 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC21.16■□□□□ 0.98
CDC42BPAQ5VT25 FBXO36P1-201ENST00000579006 471 ntBASIC21.16■□□□□ 0.98
CDC42BPAQ5VT25 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDC42BPAQ5VT25 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC21.16■□□□□ 0.98
CDC42BPAQ5VT25 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC21.16■□□□□ 0.98
CDC42BPAQ5VT25 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC21.16■□□□□ 0.98
CDC42BPAQ5VT25 AC020931.1-201ENST00000589622 1346 ntBASIC21.16■□□□□ 0.98
CDC42BPAQ5VT25 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CDC42BPAQ5VT25 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC21.16■□□□□ 0.98
CDC42BPAQ5VT25 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDC42BPAQ5VT25 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC21.16■□□□□ 0.98
CDC42BPAQ5VT25 MBP-202ENST00000355994 2772 ntTSL 5 BASIC21.16■□□□□ 0.98
CDC42BPAQ5VT25 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDC42BPAQ5VT25 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDC42BPAQ5VT25 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDC42BPAQ5VT25 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDC42BPAQ5VT25 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDC42BPAQ5VT25 RPSAP12-201ENST00000435879 888 ntBASIC21.15■□□□□ 0.98
CDC42BPAQ5VT25 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC21.15■□□□□ 0.98
CDC42BPAQ5VT25 AL136084.1-201ENST00000449172 318 ntBASIC21.15■□□□□ 0.98
CDC42BPAQ5VT25 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC21.15■□□□□ 0.98
CDC42BPAQ5VT25 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC21.15■□□□□ 0.98
CDC42BPAQ5VT25 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDC42BPAQ5VT25 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDC42BPAQ5VT25 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDC42BPAQ5VT25 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CDC42BPAQ5VT25 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC21.15■□□□□ 0.98
CDC42BPAQ5VT25 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDC42BPAQ5VT25 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDC42BPAQ5VT25 AC064850.1-201ENST00000413279 1398 ntBASIC21.15■□□□□ 0.98
CDC42BPAQ5VT25 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDC42BPAQ5VT25 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDC42BPAQ5VT25 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDC42BPAQ5VT25 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDC42BPAQ5VT25 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDC42BPAQ5VT25 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDC42BPAQ5VT25 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDC42BPAQ5VT25 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CDC42BPAQ5VT25 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CDC42BPAQ5VT25 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDC42BPAQ5VT25 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDC42BPAQ5VT25 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDC42BPAQ5VT25 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC21.15■□□□□ 0.98
CDC42BPAQ5VT25 KRT8P34-201ENST00000577607 1044 ntBASIC21.15■□□□□ 0.98
CDC42BPAQ5VT25 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC21.15■□□□□ 0.98
CDC42BPAQ5VT25 NRADDP-202ENST00000641269 1585 ntBASIC21.15■□□□□ 0.98
CDC42BPAQ5VT25 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CDC42BPAQ5VT25 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CDC42BPAQ5VT25 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC21.14■□□□□ 0.98
CDC42BPAQ5VT25 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
CDC42BPAQ5VT25 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC21.14■□□□□ 0.97
CDC42BPAQ5VT25 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CDC42BPAQ5VT25 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDC42BPAQ5VT25 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CDC42BPAQ5VT25 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
CDC42BPAQ5VT25 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
CDC42BPAQ5VT25 PHBP10-201ENST00000416467 784 ntBASIC21.14■□□□□ 0.97
CDC42BPAQ5VT25 AC004522.1-201ENST00000419978 654 ntBASIC21.14■□□□□ 0.97
CDC42BPAQ5VT25 FDPSP7-201ENST00000429043 1054 ntBASIC21.14■□□□□ 0.97
CDC42BPAQ5VT25 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC21.14■□□□□ 0.97
CDC42BPAQ5VT25 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC21.14■□□□□ 0.97
CDC42BPAQ5VT25 AC078814.4-201ENST00000546650 327 ntBASIC21.14■□□□□ 0.97
CDC42BPAQ5VT25 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC21.14■□□□□ 0.97
CDC42BPAQ5VT25 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC21.14■□□□□ 0.97
CDC42BPAQ5VT25 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC21.14■□□□□ 0.97
CDC42BPAQ5VT25 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
CDC42BPAQ5VT25 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDC42BPAQ5VT25 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDC42BPAQ5VT25 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CDC42BPAQ5VT25 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDC42BPAQ5VT25 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDC42BPAQ5VT25 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDC42BPAQ5VT25 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDC42BPAQ5VT25 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC21.14■□□□□ 0.97
CDC42BPAQ5VT25 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDC42BPAQ5VT25 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms