Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
APOBP04114 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC8.68□□□□□ -1.02
APOBP04114 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC8.68□□□□□ -1.02
APOBP04114 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC8.68□□□□□ -1.02
APOBP04114 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC8.68□□□□□ -1.02
APOBP04114 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC8.68□□□□□ -1.02
APOBP04114 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
APOBP04114 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC8.68□□□□□ -1.02
APOBP04114 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
APOBP04114 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
APOBP04114 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC8.68□□□□□ -1.02
APOBP04114 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
APOBP04114 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC8.68□□□□□ -1.02
APOBP04114 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
APOBP04114 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
APOBP04114 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
APOBP04114 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
APOBP04114 TPT1P9-201ENST00000413759 514 ntBASIC8.68□□□□□ -1.02
APOBP04114 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC8.68□□□□□ -1.02
APOBP04114 ALDOAP1-201ENST00000491506 1078 ntBASIC8.68□□□□□ -1.02
APOBP04114 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
APOBP04114 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC8.68□□□□□ -1.02
APOBP04114 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC8.68□□□□□ -1.02
APOBP04114 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC8.68□□□□□ -1.02
APOBP04114 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC8.68□□□□□ -1.02
APOBP04114 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
APOBP04114 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
APOBP04114 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
APOBP04114 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC8.68□□□□□ -1.02
APOBP04114 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC8.68□□□□□ -1.02
APOBP04114 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC8.67□□□□□ -1.02
APOBP04114 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
APOBP04114 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
APOBP04114 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
APOBP04114 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
APOBP04114 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
APOBP04114 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
APOBP04114 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
APOBP04114 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC8.67□□□□□ -1.02
APOBP04114 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
APOBP04114 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC8.67□□□□□ -1.02
APOBP04114 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC8.67□□□□□ -1.02
APOBP04114 RBMX2P5-201ENST00000424312 969 ntBASIC8.67□□□□□ -1.02
APOBP04114 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC8.67□□□□□ -1.02
APOBP04114 AC004910.1-201ENST00000433493 787 ntBASIC8.67□□□□□ -1.02
APOBP04114 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC8.67□□□□□ -1.02
APOBP04114 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC8.67□□□□□ -1.02
APOBP04114 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
APOBP04114 AC097474.1-201ENST00000506481 1371 ntBASIC8.67□□□□□ -1.02
APOBP04114 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC8.67□□□□□ -1.02
APOBP04114 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
APOBP04114 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
APOBP04114 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
APOBP04114 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC8.67□□□□□ -1.02
APOBP04114 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC8.67□□□□□ -1.02
APOBP04114 MYB-242ENST00000618728 3545 ntTSL 5 BASIC8.67□□□□□ -1.02
APOBP04114 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC8.67□□□□□ -1.02
APOBP04114 FAM86FP-201ENST00000338711 969 ntBASIC8.67□□□□□ -1.02
APOBP04114 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
APOBP04114 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC8.67□□□□□ -1.02
APOBP04114 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
APOBP04114 AC079325.1-201ENST00000430386 857 ntBASIC8.67□□□□□ -1.02
APOBP04114 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
APOBP04114 CD81-209ENST00000492627 886 ntTSL 3 BASIC8.67□□□□□ -1.02
APOBP04114 AC108112.1-201ENST00000505567 659 ntTSL 5 BASIC8.67□□□□□ -1.02
APOBP04114 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
APOBP04114 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
APOBP04114 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
APOBP04114 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
APOBP04114 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
APOBP04114 AC022966.2-201ENST00000587434 367 ntBASIC8.67□□□□□ -1.02
APOBP04114 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC8.67□□□□□ -1.02
APOBP04114 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
APOBP04114 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC8.67□□□□□ -1.02
APOBP04114 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
APOBP04114 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
APOBP04114 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
APOBP04114 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
APOBP04114 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC8.67□□□□□ -1.02
APOBP04114 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
APOBP04114 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
APOBP04114 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
APOBP04114 AL121949.1-201ENST00000402043 968 ntBASIC8.67□□□□□ -1.02
APOBP04114 IQCF4-203ENST00000428561 420 ntBASIC8.67□□□□□ -1.02
APOBP04114 NDUFB2P1-201ENST00000506966 295 ntBASIC8.67□□□□□ -1.02
APOBP04114 AC099343.1-201ENST00000513481 609 ntBASIC8.67□□□□□ -1.02
APOBP04114 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC8.67□□□□□ -1.02
APOBP04114 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC8.67□□□□□ -1.02
APOBP04114 AC009812.1-201ENST00000605948 1059 ntBASIC8.67□□□□□ -1.02
APOBP04114 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC8.67□□□□□ -1.02
APOBP04114 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
APOBP04114 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC8.67□□□□□ -1.02
APOBP04114 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
APOBP04114 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
APOBP04114 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
APOBP04114 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC8.67□□□□□ -1.02
APOBP04114 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC8.67□□□□□ -1.02
APOBP04114 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
APOBP04114 AC007950.2-201ENST00000615045 2347 ntBASIC8.67□□□□□ -1.02
APOBP04114 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms