Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.99□□□□□ -0.33
ZNF254O75437 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF254O75437 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
ZNF254O75437 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF254O75437 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF254O75437 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF254O75437 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF254O75437 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF254O75437 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF254O75437 RN7SKP230-201ENST00000365642 335 ntBASIC12.99□□□□□ -0.33
ZNF254O75437 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.99□□□□□ -0.33
ZNF254O75437 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
ZNF254O75437 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.99□□□□□ -0.33
ZNF254O75437 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF254O75437 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF254O75437 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.99□□□□□ -0.33
ZNF254O75437 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF254O75437 AC245100.3-201ENST00000441281 285 ntBASIC12.99□□□□□ -0.33
ZNF254O75437 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF254O75437 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
ZNF254O75437 MESTP3-201ENST00000503460 968 ntBASIC12.99□□□□□ -0.33
ZNF254O75437 ALG3P1-201ENST00000508806 1114 ntBASIC12.99□□□□□ -0.33
ZNF254O75437 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.99□□□□□ -0.33
ZNF254O75437 CLUHP6-201ENST00000580789 941 ntBASIC12.99□□□□□ -0.33
ZNF254O75437 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF254O75437 AP001002.3-201ENST00000623482 206 ntBASIC12.99□□□□□ -0.33
ZNF254O75437 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF254O75437 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF254O75437 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.99□□□□□ -0.33
ZNF254O75437 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
ZNF254O75437 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF254O75437 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
ZNF254O75437 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF254O75437 AC139712.1-201ENST00000378256 1875 ntBASIC12.99□□□□□ -0.33
ZNF254O75437 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF254O75437 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF254O75437 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF254O75437 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
ZNF254O75437 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF254O75437 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
ZNF254O75437 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.99□□□□□ -0.33
ZNF254O75437 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
ZNF254O75437 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF254O75437 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.98□□□□□ -0.33
ZNF254O75437 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.98□□□□□ -0.33
ZNF254O75437 AC023794.5-201ENST00000564380 2157 ntBASIC12.98□□□□□ -0.33
ZNF254O75437 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF254O75437 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF254O75437 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF254O75437 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ZNF254O75437 AC007541.1-201ENST00000570282 1469 ntBASIC12.98□□□□□ -0.33
ZNF254O75437 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF254O75437 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF254O75437 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
ZNF254O75437 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF254O75437 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF254O75437 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF254O75437 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF254O75437 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ZNF254O75437 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF254O75437 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF254O75437 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ZNF254O75437 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC12.98□□□□□ -0.33
ZNF254O75437 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
ZNF254O75437 AC098850.1-201ENST00000419919 790 ntBASIC12.98□□□□□ -0.33
ZNF254O75437 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.98□□□□□ -0.33
ZNF254O75437 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF254O75437 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.98□□□□□ -0.33
ZNF254O75437 AL132655.2-201ENST00000596276 594 ntBASIC12.98□□□□□ -0.33
ZNF254O75437 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF254O75437 AC004233.3-201ENST00000607794 1269 ntBASIC12.98□□□□□ -0.33
ZNF254O75437 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF254O75437 CU634019.7-201ENST00000624153 1185 ntBASIC12.98□□□□□ -0.33
ZNF254O75437 FP236241.2-201ENST00000624906 1185 ntBASIC12.98□□□□□ -0.33
ZNF254O75437 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ZNF254O75437 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.98□□□□□ -0.33
ZNF254O75437 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.98□□□□□ -0.33
ZNF254O75437 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF254O75437 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF254O75437 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
ZNF254O75437 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ZNF254O75437 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
ZNF254O75437 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF254O75437 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
ZNF254O75437 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF254O75437 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
ZNF254O75437 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
ZNF254O75437 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF254O75437 AC105206.1-202ENST00000314927 2368 ntBASIC12.98□□□□□ -0.33
ZNF254O75437 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
ZNF254O75437 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
ZNF254O75437 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
ZNF254O75437 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
ZNF254O75437 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF254O75437 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.97□□□□□ -0.33
ZNF254O75437 DUSP10-201ENST00000366899 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF254O75437 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
ZNF254O75437 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
ZNF254O75437 ZNF148-205ENST00000484491 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZNF254O75437 KHSRPP1-201ENST00000427983 1768 ntBASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms