Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 DHODH-205ENST00000572887 4824 ntAPPRIS ALT1 TSL 5 BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 PCNX2-203ENST00000344698 5348 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 ERBB2-203ENST00000445658 3238 ntTSL 2 BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 FP565260.1-201ENST00000617716 3264 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 LRRC8E-201ENST00000306708 3595 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 GREB1L-202ENST00000424526 6052 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 ACBD5-203ENST00000375901 3685 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 AC239809.2-201ENST00000415381 517 ntBASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 AC087163.2-201ENST00000457299 853 ntBASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 RHEB-204ENST00000472642 900 ntTSL 3 BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 JPT2-214ENST00000569765 782 ntTSL 2 BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 AC073195.1-201ENST00000607241 877 ntBASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 SPAG5-201ENST00000321765 4040 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 FMNL1-202ENST00000331495 4101 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 AL589702.1-201ENST00000641229 1509 ntBASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 KCNH1-209ENST00000639952 8075 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01558Q9Y6Z2 SNU13-203ENST00000401959 1670 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.23
LINC01558Q9Y6Z2 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.23
LINC01558Q9Y6Z2 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC7.4□□□□□ -1.23
LINC01558Q9Y6Z2 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.23
LINC01558Q9Y6Z2 MMP19-206ENST00000548629 1813 ntTSL 5 BASIC7.4□□□□□ -1.23
LINC01558Q9Y6Z2 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
LINC01558Q9Y6Z2 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.23
LINC01558Q9Y6Z2 MROH7-TTC4-201ENST00000414150 5867 ntAPPRIS P5 TSL 2 BASIC7.4□□□□□ -1.23
LINC01558Q9Y6Z2 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
LINC01558Q9Y6Z2 RBMX-201ENST00000320676 2012 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
LINC01558Q9Y6Z2 TP53TG3B-201ENST00000341305 2034 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.23
LINC01558Q9Y6Z2 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
LINC01558Q9Y6Z2 SLC5A11-209ENST00000567758 2246 ntTSL 5 BASIC7.4□□□□□ -1.23
LINC01558Q9Y6Z2 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
LINC01558Q9Y6Z2 FBLN1-203ENST00000340923 2348 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
LINC01558Q9Y6Z2 NEFM-204ENST00000518131 2500 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.23
LINC01558Q9Y6Z2 NUMB-212ENST00000554546 3607 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.23
LINC01558Q9Y6Z2 RIMS2-207ENST00000504942 4228 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.23
LINC01558Q9Y6Z2 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC7.4□□□□□ -1.23
LINC01558Q9Y6Z2 RGL1-202ENST00000360851 4724 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 SCN4B-201ENST00000324727 4484 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 RAPGEF3-202ENST00000395358 4092 ntTSL 2 BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 WDR41-201ENST00000296679 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 FP565324.1-201ENST00000636427 3659 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 TSPEAR-203ENST00000613245 3524 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 FOXO4-202ENST00000374259 3301 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 FAM47DP-201ENST00000402340 3290 ntBASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 MYADM-204ENST00000391770 3056 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 SEMA4A-203ENST00000368284 2981 ntTSL 2 BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 AC005014.1-201ENST00000432006 2976 ntBASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 TNIP1-201ENST00000315050 2785 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 PLA2G4E-AS1-201ENST00000499478 2499 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 ALDH8A1-203ENST00000367845 2383 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 SLC35B4-201ENST00000378509 6797 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 SLC10A1-201ENST00000216540 2049 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 NCBP2L-202ENST00000639756 1953 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 LINC00303-201ENST00000367207 1891 ntTSL 2 BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 FAM200B-223ENST00000622362 4377 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms