RNA–Protein interactions for RNA: ENST00000402340.2

FAM47DP-201, Transcript of family with sequence similarity 47 member D, pseudogene, humanhuman

BASIC

Gene FAM47DP, Length 3,290 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM47DP-201ENST00000402340 NISCHQ9Y2I1 1504 aa25.59■■□□□ 1.69
FAM47DP-201ENST00000402340 CCDC180Q9P1Z9 1646 aa21.74■■□□□ 1.07
FAM47DP-201ENST00000402340 ZCCHC6Q5VYS8 1495 aaKnown RBP21.73■■□□□ 1.07
FAM47DP-201ENST00000402340 SHROOM4Q9ULL8 1493 aa21.64■■□□□ 1.05
FAM47DP-201ENST00000402340 SUPT5HO00267 1087 aaKnown RBP21.31■■□□□ 1
FAM47DP-201ENST00000402340 DCAF1Q9Y4B6 1507 aa21.14■□□□□ 0.97
FAM47DP-201ENST00000402340 CHIC1Q5VXU3 224 aa21.02■□□□□ 0.96
FAM47DP-201ENST00000402340 MYO15BQ96JP2 1530 aa21.01■□□□□ 0.95
FAM47DP-201ENST00000402340 HRCP23327 699 aa20.73■□□□□ 0.91
FAM47DP-201ENST00000402340 DCAF8L2P0C7V8 631 aa20.72■□□□□ 0.91
FAM47DP-201ENST00000402340 ABCC9O60706 1549 aa20.54■□□□□ 0.88
FAM47DP-201ENST00000402340 PCGF6Q9BYE7 350 aa20.43■□□□□ 0.86
FAM47DP-201ENST00000402340 RSF1Q96T23 1441 aaPredicted RBP20.3■□□□□ 0.84
FAM47DP-201ENST00000402340 LOC105371045A0A1W2PR82 267 aa20.28■□□□□ 0.84
FAM47DP-201ENST00000402340 SCRIBQ14160 1630 aa20.21■□□□□ 0.83
FAM47DP-201ENST00000402340 RB1CC1Q8TDY2 1594 aa20.15■□□□□ 0.82
FAM47DP-201ENST00000402340 TRIM26Q12899 539 aaPredicted RBP20.13■□□□□ 0.81
FAM47DP-201ENST00000402340 PPARGC1BQ86YN6 1023 aaKnown RBP20.11■□□□□ 0.81
FAM47DP-201ENST00000402340 NACADO15069 1562 aa20.01■□□□□ 0.79
FAM47DP-201ENST00000402340 TRIM41Q8WV44 630 aa19.93■□□□□ 0.78
FAM47DP-201ENST00000402340 CECR2Q9BXF3 1484 aa19.86■□□□□ 0.77
FAM47DP-201ENST00000402340 MROH2BQ7Z745 1585 aa19.85■□□□□ 0.77
FAM47DP-201ENST00000402340 ZEB1P37275 1124 aaPredicted RBP19.82■□□□□ 0.76
FAM47DP-201ENST00000402340 WIZO95785 1651 aa19.74■□□□□ 0.75
FAM47DP-201ENST00000402340 EIF4G1Q04637 1599 aaKnown RBP19.74■□□□□ 0.75
FAM47DP-201ENST00000402340 BAZ1AQ9NRL2 1556 aaPredicted RBP19.73■□□□□ 0.75
FAM47DP-201ENST00000402340 FAM9AQ8IZU1 332 aaPredicted RBP19.63■□□□□ 0.73
FAM47DP-201ENST00000402340 TOP2AP11388 1531 aaKnown RBP19.51■□□□□ 0.71
FAM47DP-201ENST00000402340 SMARCA4P51532 1647 aa19.44■□□□□ 0.7
FAM47DP-201ENST00000402340 WRNQ14191 1432 aaPredicted RBP eCLIP19.4■□□□□ 0.7
FAM47DP-201ENST00000402340 SMARCA2P51531 1590 aa19.39■□□□□ 0.7
FAM47DP-201ENST00000402340 CCDC88BA6NC98 1476 aa19.38■□□□□ 0.69
FAM47DP-201ENST00000402340 EHMT2Q96KQ7 1210 aa19.32■□□□□ 0.68
FAM47DP-201ENST00000402340 ABCC8Q09428 1581 aa19.32■□□□□ 0.68
FAM47DP-201ENST00000402340 UNC13AQ9UPW8 1703 aa19.31■□□□□ 0.68
FAM47DP-201ENST00000402340 EEA1Q15075 1411 aa19.26■□□□□ 0.67
FAM47DP-201ENST00000402340 TNIKQ9UKE5 1360 aa19.24■□□□□ 0.67
FAM47DP-201ENST00000402340 CEP162Q5TB80 1403 aa19.22■□□□□ 0.67
FAM47DP-201ENST00000402340 SOGA1O94964 1423 aa19.19■□□□□ 0.66
FAM47DP-201ENST00000402340 SCAF1Q9H7N4 1312 aaKnown RBP19.18■□□□□ 0.66
FAM47DP-201ENST00000402340 PEG3Q9GZU2 1588 aa19.18■□□□□ 0.66
FAM47DP-201ENST00000402340 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.16■□□□□ 0.66
FAM47DP-201ENST00000402340 PELP1Q8IZL8 1130 aaKnown RBP19.12■□□□□ 0.65
FAM47DP-201ENST00000402340 CCER1Q8TC90 406 aaPredicted RBP19.12■□□□□ 0.65
FAM47DP-201ENST00000402340 BICRAQ9NZM4 1560 aa19.09■□□□□ 0.65
FAM47DP-201ENST00000402340 CSRNP3Q8WYN3 585 aa19.09■□□□□ 0.65
FAM47DP-201ENST00000402340 RUSC2Q8N2Y8 1516 aa19.08■□□□□ 0.64
FAM47DP-201ENST00000402340 GOLGA3Q08378 1498 aa19.06■□□□□ 0.64
FAM47DP-201ENST00000402340 KIF21BO75037 1637 aa19■□□□□ 0.63
FAM47DP-201ENST00000402340 ACIN1Q9UKV3 1341 aaKnown RBP18.96■□□□□ 0.63
FAM47DP-201ENST00000402340 SYNJ1O43426 1573 aa18.95■□□□□ 0.62
FAM47DP-201ENST00000402340 CEP164Q9UPV0 1460 aa18.95■□□□□ 0.62
FAM47DP-201ENST00000402340 DIEXFQ68CQ4 756 aaKnown RBP18.92■□□□□ 0.62
FAM47DP-201ENST00000402340 UBTFP17480 764 aaKnown RBP18.89■□□□□ 0.61
FAM47DP-201ENST00000402340 BAZ1BQ9UIG0 1483 aaKnown RBP18.88■□□□□ 0.61
FAM47DP-201ENST00000402340 NEUROD1Q13562 356 aa18.87■□□□□ 0.61
FAM47DP-201ENST00000402340 ATAD2BQ9ULI0 1458 aa18.87■□□□□ 0.61
FAM47DP-201ENST00000402340 VPS8Q8N3P4 1428 aa18.81■□□□□ 0.6
FAM47DP-201ENST00000402340 CLIP1P30622 1438 aa18.81■□□□□ 0.6
FAM47DP-201ENST00000402340 PABPN1Q86U42 306 aaKnown RBP eCLIP18.8■□□□□ 0.6
FAM47DP-201ENST00000402340 TTBK1Q5TCY1 1321 aaPredicted RBP18.78■□□□□ 0.6
FAM47DP-201ENST00000402340 ZNF316A6NFI3 1004 aaPredicted RBP18.78■□□□□ 0.6
FAM47DP-201ENST00000402340 CENPBP07199 599 aaPredicted RBP18.76■□□□□ 0.59
FAM47DP-201ENST00000402340 TOP2BQ02880 1626 aa18.76■□□□□ 0.59
FAM47DP-201ENST00000402340 RAPGEF2Q9Y4G8 1499 aa18.74■□□□□ 0.59
FAM47DP-201ENST00000402340 BIVM-ERCC5R4GMW8 1640 aa18.71■□□□□ 0.59
FAM47DP-201ENST00000402340 ERICH3Q5RHP9 1530 aa18.67■□□□□ 0.58
FAM47DP-201ENST00000402340 GTF3C3Q9Y5Q9 886 aa18.66■□□□□ 0.58
FAM47DP-201ENST00000402340 PRXQ9BXM0 1461 aa18.63■□□□□ 0.57
FAM47DP-201ENST00000402340 HNRNPUL2Q1KMD3 747 aaKnown RBP18.57■□□□□ 0.56
FAM47DP-201ENST00000402340 CLSPNQ9HAW4 1339 aa18.56■□□□□ 0.56
FAM47DP-201ENST00000402340 ARAP1Q96P48 1450 aa18.55■□□□□ 0.56
FAM47DP-201ENST00000402340 HMGXB3Q12766 1538 aa18.55■□□□□ 0.56
FAM47DP-201ENST00000402340 APLP2Q06481 763 aa18.52■□□□□ 0.56
FAM47DP-201ENST00000402340 NCAPD3P42695 1498 aa18.52■□□□□ 0.55
FAM47DP-201ENST00000402340 MIER1Q8N108 512 aa18.49■□□□□ 0.55
FAM47DP-201ENST00000402340 CUX1P39880 1505 aa18.48■□□□□ 0.55
FAM47DP-201ENST00000402340 RRBP1Q9P2E9 1410 aaKnown RBP18.47■□□□□ 0.55
FAM47DP-201ENST00000402340 CUX2O14529 1486 aa18.46■□□□□ 0.55
FAM47DP-201ENST00000402340 DHX57Q6P158 1386 aaKnown RBP18.46■□□□□ 0.55
FAM47DP-201ENST00000402340 CFTRP13569 1480 aa18.41■□□□□ 0.54
FAM47DP-201ENST00000402340 KIF27Q86VH2 1401 aa18.41■□□□□ 0.54
FAM47DP-201ENST00000402340 KANK4Q5T7N3 995 aaPredicted RBP18.36■□□□□ 0.53
FAM47DP-201ENST00000402340 ARHGAP35Q9NRY4 1499 aa18.35■□□□□ 0.53
FAM47DP-201ENST00000402340 YTHDC1Q96MU7 727 aaKnown RBP18.32■□□□□ 0.52
FAM47DP-201ENST00000402340 PRDM2Q13029 1718 aa18.32■□□□□ 0.52
FAM47DP-201ENST00000402340 MAP3K1Q13233 1512 aa18.31■□□□□ 0.52
FAM47DP-201ENST00000402340 RANGAP1P46060 587 aaPredicted RBP18.29■□□□□ 0.52
FAM47DP-201ENST00000402340 CCNB3Q8WWL7 1395 aa18.27■□□□□ 0.52
FAM47DP-201ENST00000402340 MYT1Q01538 1121 aa18.22■□□□□ 0.51
FAM47DP-201ENST00000402340 IGF1RP08069 1367 aa18.21■□□□□ 0.51
FAM47DP-201ENST00000402340 TIAM1Q13009 1591 aa18.2■□□□□ 0.5
FAM47DP-201ENST00000402340 MAPKBP1O60336 1514 aa18.17■□□□□ 0.5
FAM47DP-201ENST00000402340 LRRC9Q6ZRR7 1453 aa18.12■□□□□ 0.49
FAM47DP-201ENST00000402340 RAB3GAP2Q9H2M9 1393 aa18.11■□□□□ 0.49
FAM47DP-201ENST00000402340 CADPSQ9ULU8 1353 aa18.1■□□□□ 0.49
FAM47DP-201ENST00000402340 CFAP43Q8NDM7 1665 aa18.09■□□□□ 0.49
FAM47DP-201ENST00000402340 CARMIL1Q5VZK9 1371 aa18.09■□□□□ 0.49
FAM47DP-201ENST00000402340 FGD5Q6ZNL6 1462 aa18.07■□□□□ 0.48
FAM47DP-201ENST00000402340 SETD5Q9C0A6 1442 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms