Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CMSS1Q9BQ75 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
CMSS1Q9BQ75 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CMSS1Q9BQ75 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CMSS1Q9BQ75 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CMSS1Q9BQ75 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CMSS1Q9BQ75 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CMSS1Q9BQ75 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CMSS1Q9BQ75 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CMSS1Q9BQ75 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 INTS4P2-202ENST00000614726 2019 ntBASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 VMA21-202ENST00000370361 693 ntTSL 5 BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 AC134915.1-201ENST00000426461 574 ntBASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 AC114812.1-204ENST00000449669 728 ntBASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 AP001582.1-201ENST00000525856 295 ntBASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 AC104794.3-201ENST00000566840 1248 ntBASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 SPDYE22P-201ENST00000582158 798 ntBASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 MIR6074-201ENST00000612054 107 ntBASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 AC022144.1-201ENST00000602255 1580 ntBASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CMSS1Q9BQ75 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CMSS1Q9BQ75 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CMSS1Q9BQ75 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CMSS1Q9BQ75 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CMSS1Q9BQ75 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CMSS1Q9BQ75 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CMSS1Q9BQ75 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CMSS1Q9BQ75 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CMSS1Q9BQ75 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CMSS1Q9BQ75 AC215219.1-201ENST00000400706 1817 ntBASIC12.53□□□□□ -0.4
CMSS1Q9BQ75 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CMSS1Q9BQ75 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CMSS1Q9BQ75 LRRC59-203ENST00000576448 1531 ntBASIC12.53□□□□□ -0.4
CMSS1Q9BQ75 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
CMSS1Q9BQ75 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.53□□□□□ -0.4
CMSS1Q9BQ75 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CMSS1Q9BQ75 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CMSS1Q9BQ75 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CMSS1Q9BQ75 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CMSS1Q9BQ75 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.53□□□□□ -0.4
CMSS1Q9BQ75 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.53□□□□□ -0.4
CMSS1Q9BQ75 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CMSS1Q9BQ75 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CMSS1Q9BQ75 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms