Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
PCNX1Q96RV3 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PCNX1Q96RV3 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.78□□□□□ -0.36
PCNX1Q96RV3 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.78□□□□□ -0.36
PCNX1Q96RV3 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PCNX1Q96RV3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PCNX1Q96RV3 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
PCNX1Q96RV3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC12.77□□□□□ -0.36
PCNX1Q96RV3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
PCNX1Q96RV3 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PCNX1Q96RV3 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.77□□□□□ -0.36
PCNX1Q96RV3 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC12.77□□□□□ -0.36
PCNX1Q96RV3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC12.77□□□□□ -0.36
PCNX1Q96RV3 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
PCNX1Q96RV3 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PCNX1Q96RV3 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
PCNX1Q96RV3 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PCNX1Q96RV3 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
PCNX1Q96RV3 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC12.77□□□□□ -0.36
PCNX1Q96RV3 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC12.77□□□□□ -0.36
PCNX1Q96RV3 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
PCNX1Q96RV3 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.77□□□□□ -0.36
PCNX1Q96RV3 AC124068.2-201ENST00000569473 1109 ntBASIC12.77□□□□□ -0.36
PCNX1Q96RV3 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PCNX1Q96RV3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
PCNX1Q96RV3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PCNX1Q96RV3 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PCNX1Q96RV3 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.77□□□□□ -0.37
PCNX1Q96RV3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
PCNX1Q96RV3 AC025183.3-201ENST00000623526 1482 ntBASIC12.77□□□□□ -0.37
PCNX1Q96RV3 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.77□□□□□ -0.37
PCNX1Q96RV3 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
PCNX1Q96RV3 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PCNX1Q96RV3 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PCNX1Q96RV3 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PCNX1Q96RV3 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PCNX1Q96RV3 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PCNX1Q96RV3 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PCNX1Q96RV3 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PCNX1Q96RV3 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PCNX1Q96RV3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC12.77□□□□□ -0.37
PCNX1Q96RV3 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.77□□□□□ -0.37
PCNX1Q96RV3 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
PCNX1Q96RV3 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PCNX1Q96RV3 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC12.77□□□□□ -0.37
PCNX1Q96RV3 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PCNX1Q96RV3 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.77□□□□□ -0.37
PCNX1Q96RV3 CICP12-201ENST00000455801 843 ntBASIC12.77□□□□□ -0.37
PCNX1Q96RV3 RN7SL396P-201ENST00000471086 295 ntBASIC12.77□□□□□ -0.37
PCNX1Q96RV3 AC012158.2-201ENST00000536546 354 ntBASIC12.77□□□□□ -0.37
PCNX1Q96RV3 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.37
PCNX1Q96RV3 RPS5-204ENST00000598098 536 ntTSL 2 BASIC12.77□□□□□ -0.37
PCNX1Q96RV3 AC007326.1-201ENST00000604539 458 ntBASIC12.77□□□□□ -0.37
PCNX1Q96RV3 AC002044.2-201ENST00000624910 970 ntBASIC12.77□□□□□ -0.37
PCNX1Q96RV3 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
PCNX1Q96RV3 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.77□□□□□ -0.37
PCNX1Q96RV3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PCNX1Q96RV3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PCNX1Q96RV3 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PCNX1Q96RV3 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PCNX1Q96RV3 AC013268.4-201ENST00000637413 2228 ntBASIC12.76□□□□□ -0.37
PCNX1Q96RV3 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
PCNX1Q96RV3 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PCNX1Q96RV3 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
PCNX1Q96RV3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PCNX1Q96RV3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.76□□□□□ -0.37
PCNX1Q96RV3 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PCNX1Q96RV3 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.76□□□□□ -0.37
PCNX1Q96RV3 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.76□□□□□ -0.37
PCNX1Q96RV3 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
PCNX1Q96RV3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PCNX1Q96RV3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PCNX1Q96RV3 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PCNX1Q96RV3 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PCNX1Q96RV3 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC12.76□□□□□ -0.37
PCNX1Q96RV3 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC12.76□□□□□ -0.37
PCNX1Q96RV3 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PCNX1Q96RV3 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PCNX1Q96RV3 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC12.76□□□□□ -0.37
PCNX1Q96RV3 AC093752.3-201ENST00000567343 901 ntBASIC12.76□□□□□ -0.37
PCNX1Q96RV3 RN7SL665P-201ENST00000578793 300 ntBASIC12.76□□□□□ -0.37
PCNX1Q96RV3 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC12.76□□□□□ -0.37
PCNX1Q96RV3 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
PCNX1Q96RV3 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PCNX1Q96RV3 AC018695.6-201ENST00000614011 534 ntBASIC12.76□□□□□ -0.37
PCNX1Q96RV3 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.76□□□□□ -0.37
PCNX1Q96RV3 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PCNX1Q96RV3 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PCNX1Q96RV3 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PCNX1Q96RV3 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PCNX1Q96RV3 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
PCNX1Q96RV3 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
PCNX1Q96RV3 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.76□□□□□ -0.37
PCNX1Q96RV3 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PCNX1Q96RV3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PCNX1Q96RV3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PCNX1Q96RV3 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PCNX1Q96RV3 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PCNX1Q96RV3 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
PCNX1Q96RV3 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms