Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 AC113367.3-201ENST00000508316 1912 ntBASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2E2Q96LR5 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
UBE2E2Q96LR5 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
UBE2E2Q96LR5 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
UBE2E2Q96LR5 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
UBE2E2Q96LR5 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
UBE2E2Q96LR5 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
UBE2E2Q96LR5 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
UBE2E2Q96LR5 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
UBE2E2Q96LR5 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
UBE2E2Q96LR5 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
UBE2E2Q96LR5 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
UBE2E2Q96LR5 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
UBE2E2Q96LR5 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
UBE2E2Q96LR5 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 AC092053.3-201ENST00000641308 4975 ntBASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 HNRNPA1P41-201ENST00000397777 928 ntBASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 ST13P19-201ENST00000442505 1124 ntBASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 SDHD-202ENST00000525291 790 ntTSL 3 BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 AC090857.1-201ENST00000527400 390 ntBASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 RERG-205ENST00000537647 935 ntTSL 2 BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 AC003686.1-201ENST00000550956 1034 ntBASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 ACTG1P17-201ENST00000558391 1119 ntBASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 AC124068.2-201ENST00000569473 1109 ntBASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 RN7SL774P-201ENST00000577467 290 ntBASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 AC007686.3-201ENST00000619017 3487 ntBASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.61
UBE2E2Q96LR5 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2E2Q96LR5 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms