Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VBP1P61758 AC026271.4-201ENST00000578214 1833 ntBASIC13.08□□□□□ -0.32
VBP1P61758 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
VBP1P61758 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VBP1P61758 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VBP1P61758 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VBP1P61758 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.08□□□□□ -0.32
VBP1P61758 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.08□□□□□ -0.32
VBP1P61758 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
VBP1P61758 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VBP1P61758 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC13.08□□□□□ -0.32
VBP1P61758 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VBP1P61758 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
VBP1P61758 TRIM80P-201ENST00000455685 2848 ntBASIC13.08□□□□□ -0.32
VBP1P61758 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VBP1P61758 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
VBP1P61758 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VBP1P61758 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VBP1P61758 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
VBP1P61758 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
VBP1P61758 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
VBP1P61758 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
VBP1P61758 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VBP1P61758 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
VBP1P61758 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VBP1P61758 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VBP1P61758 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
VBP1P61758 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC13.07□□□□□ -0.32
VBP1P61758 AL158070.2-201ENST00000623713 1621 ntBASIC13.07□□□□□ -0.32
VBP1P61758 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VBP1P61758 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VBP1P61758 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
VBP1P61758 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC13.07□□□□□ -0.32
VBP1P61758 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VBP1P61758 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VBP1P61758 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VBP1P61758 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
VBP1P61758 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.07□□□□□ -0.32
VBP1P61758 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.07□□□□□ -0.32
VBP1P61758 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.07□□□□□ -0.32
VBP1P61758 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VBP1P61758 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.07□□□□□ -0.32
VBP1P61758 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.07□□□□□ -0.32
VBP1P61758 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.07□□□□□ -0.32
VBP1P61758 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.07□□□□□ -0.32
VBP1P61758 AC026150.2-201ENST00000564693 1156 ntBASIC13.07□□□□□ -0.32
VBP1P61758 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC13.07□□□□□ -0.32
VBP1P61758 AC064836.3-201ENST00000607928 673 ntBASIC13.07□□□□□ -0.32
VBP1P61758 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VBP1P61758 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
VBP1P61758 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VBP1P61758 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VBP1P61758 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
VBP1P61758 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VBP1P61758 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC13.07□□□□□ -0.32
VBP1P61758 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
VBP1P61758 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC13.07□□□□□ -0.32
VBP1P61758 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VBP1P61758 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
VBP1P61758 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC13.07□□□□□ -0.32
VBP1P61758 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VBP1P61758 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VBP1P61758 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
VBP1P61758 UXT-AS1-201ENST00000590504 1525 ntBASIC13.07□□□□□ -0.32
VBP1P61758 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VBP1P61758 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC13.07□□□□□ -0.32
VBP1P61758 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.07□□□□□ -0.32
VBP1P61758 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC13.07□□□□□ -0.32
VBP1P61758 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VBP1P61758 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.07□□□□□ -0.32
VBP1P61758 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VBP1P61758 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VBP1P61758 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VBP1P61758 AC010970.1-201ENST00000445125 1848 ntBASIC13.06□□□□□ -0.32
VBP1P61758 AL359845.1-201ENST00000458202 1648 ntBASIC13.06□□□□□ -0.32
VBP1P61758 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
VBP1P61758 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VBP1P61758 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
VBP1P61758 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VBP1P61758 AC073957.3-201ENST00000609998 6758 ntBASIC13.06□□□□□ -0.32
VBP1P61758 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VBP1P61758 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VBP1P61758 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VBP1P61758 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
VBP1P61758 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VBP1P61758 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
VBP1P61758 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VBP1P61758 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.06□□□□□ -0.32
VBP1P61758 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VBP1P61758 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VBP1P61758 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VBP1P61758 TOMM22P5-201ENST00000416399 439 ntBASIC13.06□□□□□ -0.32
VBP1P61758 HCG4P8-203ENST00000443049 980 ntBASIC13.06□□□□□ -0.32
VBP1P61758 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.06□□□□□ -0.32
VBP1P61758 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.06□□□□□ -0.32
VBP1P61758 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
VBP1P61758 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
VBP1P61758 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
VBP1P61758 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.06□□□□□ -0.32
VBP1P61758 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms