Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.084e-7■■□□□ 12.5
U2AF2P26368 RAB11FIP3-204ENST00000449879 580 ntTSL 318.25■□□□□ 0.511e-6■■□□□ 12.5
U2AF2P26368 RAB11FIP3-206ENST00000452814 804 ntTSL 517.2■□□□□ 0.341e-6■■□□□ 12.5
U2AF2P26368 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.12e-10■■□□□ 12.5
U2AF2P26368 SUPV3L1-203ENST00000471069 2392 ntTSL 1 (best)13.64□□□□□ -0.232e-10■■□□□ 12.5
U2AF2P26368 SUPV3L1-205ENST00000483572 1025 ntTSL 511.12□□□□□ -0.632e-10■■□□□ 12.5
U2AF2P26368 SUPV3L1-202ENST00000422378 794 ntTSL 59.17□□□□□ -0.942e-10■■□□□ 12.5
U2AF2P26368 SUPV3L1-204ENST00000478227 597 ntTSL 56.84□□□□□ -1.312e-10■■□□□ 12.5
U2AF2P26368 SUPV3L1-206ENST00000486661 518 ntTSL 56.23□□□□□ -1.412e-10■■□□□ 12.5
U2AF2P26368 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.311e-7■■□□□ 12.5
U2AF2P26368 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC28.68■■■□□ 2.181e-7■■□□□ 12.5
U2AF2P26368 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.611e-8■■□□□ 12.5
U2AF2P26368 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC23.75■■□□□ 1.392e-10■■□□□ 12.5
U2AF2P26368 GAS8-204ENST00000540721 1308 ntTSL 221.29■■□□□ 12e-10■■□□□ 12.5
U2AF2P26368 GAS8-206ENST00000563980 546 ntTSL 419.82■□□□□ 0.762e-10■■□□□ 12.5
U2AF2P26368 GAS8-217ENST00000568705 659 ntTSL 319.31■□□□□ 0.682e-10■■□□□ 12.5
U2AF2P26368 GAS8-212ENST00000565062 1394 ntTSL 219.14■□□□□ 0.652e-10■■□□□ 12.5
U2AF2P26368 GAS8-213ENST00000565957 549 ntTSL 418.62■□□□□ 0.572e-10■■□□□ 12.5
U2AF2P26368 GAS8-203ENST00000537797 1080 ntTSL 216.95■□□□□ 0.32e-10■■□□□ 12.5
U2AF2P26368 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC15.52■□□□□ 0.072e-10■■□□□ 12.5
U2AF2P26368 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.042e-10■■□□□ 12.5
U2AF2P26368 GAS8-216ENST00000568664 341 ntTSL 512.51□□□□□ -0.412e-10■■□□□ 12.5
U2AF2P26368 GAS8-214ENST00000566266 3174 ntTSL 1 (best)12.45□□□□□ -0.422e-10■■□□□ 12.5
U2AF2P26368 GAS8-219ENST00000569558 3856 ntTSL 212.25□□□□□ -0.452e-10■■□□□ 12.5
U2AF2P26368 GAS8-205ENST00000561675 486 ntTSL 310.42□□□□□ -0.742e-10■■□□□ 12.5
U2AF2P26368 GAS8-207ENST00000564392 479 ntTSL 39.36□□□□□ -0.912e-10■■□□□ 12.5
U2AF2P26368 ABCD3-205ENST00000484213 4367 ntTSL 1 (best)4.33□□□□□ -1.721e-6■■□□□ 12.5
U2AF2P26368 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.384e-7■■□□□ 12.5
U2AF2P26368 DDX42-205ENST00000577978 581 ntTSL 54.18□□□□□ -1.744e-8■■□□□ 12.5
U2AF2P26368 DDX42-209ENST00000579511 594 ntTSL 53.8□□□□□ -1.84e-8■■□□□ 12.5
U2AF2P26368 CYFIP1-214ENST00000622576 583 ntTSL 424.82■■□□□ 1.562e-7■■□□□ 12.5
U2AF2P26368 CYFIP1-207ENST00000617556 5674 ntTSL 1 (best) BASIC13.37□□□□□ -0.272e-7■■□□□ 12.5
U2AF2P26368 CYFIP1-203ENST00000610365 4515 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.522e-7■■□□□ 12.5
U2AF2P26368 CYFIP1-205ENST00000612288 553 ntTSL 311.77□□□□□ -0.532e-7■■□□□ 12.5
U2AF2P26368 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.892e-7■■□□□ 12.5
U2AF2P26368 IWS1-201ENST00000295321 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.084e-6■■□□□ 12.5
U2AF2P26368 CCNT2-210ENST00000475094 606 ntTSL 216.08■□□□□ 0.161e-6■■□□□ 12.5
U2AF2P26368 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.77■□□□□ 0.289e-9■■□□□ 12.5
U2AF2P26368 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.039e-9■■□□□ 12.5
U2AF2P26368 SNRPC-203ENST00000374018 600 ntTSL 5 BASIC11.91□□□□□ -0.59e-9■■□□□ 12.5
U2AF2P26368 SNRPC-204ENST00000474635 511 ntTSL 59.56□□□□□ -0.889e-9■■□□□ 12.5
U2AF2P26368 DNPEP-218ENST00000521459 714 ntTSL 521.44■■□□□ 1.022e-9■■□□□ 12.5
U2AF2P26368 DNPEP-206ENST00000429013 896 ntTSL 519.95■□□□□ 0.782e-9■■□□□ 12.5
U2AF2P26368 DNPEP-209ENST00000457935 1091 ntTSL 514.95□□□□□ -0.022e-9■■□□□ 12.5
U2AF2P26368 DNPEP-210ENST00000460963 1610 ntTSL 214.78□□□□□ -0.042e-9■■□□□ 12.5
U2AF2P26368 ATP2A2-211ENST00000552636 529 ntTSL 4 BASIC14.32□□□□□ -0.122e-6■■□□□ 12.5
U2AF2P26368 ACACA-233ENST00000614450 591 ntTSL 46.21□□□□□ -1.422e-7■■□□□ 12.5
U2AF2P26368 HMGCS1-206ENST00000511774 500 ntTSL 420.72■□□□□ 0.911e-12■■□□□ 12.4
U2AF2P26368 HMGCS1-203ENST00000507004 950 ntTSL 215.97■□□□□ 0.151e-12■■□□□ 12.4
U2AF2P26368 HMGCS1-204ENST00000507293 708 ntTSL 1 (best)12.7□□□□□ -0.381e-12■■□□□ 12.4
U2AF2P26368 ENPP3-205ENST00000427707 1536 ntTSL 1 (best)9.03□□□□□ -0.962e-7■■□□□ 12.4
U2AF2P26368 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC16.14■□□□□ 0.176e-9■■□□□ 12.4
U2AF2P26368 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC15.76■□□□□ 0.116e-9■■□□□ 12.4
U2AF2P26368 IFT172-208ENST00000475476 781 ntTSL 214.93□□□□□ -0.026e-9■■□□□ 12.4
U2AF2P26368 IFT172-218ENST00000511842 1832 ntTSL 511.72□□□□□ -0.536e-9■■□□□ 12.4
U2AF2P26368 IFT172-210ENST00000476264 1867 ntTSL 29.23□□□□□ -0.936e-9■■□□□ 12.4
U2AF2P26368 ATRX-218ENST00000624766 580 ntTSL 20.63□□□□□ -2.311e-6■■□□□ 12.4
U2AF2P26368 MPHOSPH6-206ENST00000568016 432 ntTSL 521.43■■□□□ 1.025e-11■■□□□ 12.4
U2AF2P26368 MPHOSPH6-204ENST00000566748 710 ntTSL 320.83■□□□□ 0.935e-11■■□□□ 12.4
U2AF2P26368 MPHOSPH6-202ENST00000563100 723 ntTSL 514.46□□□□□ -0.095e-11■■□□□ 12.4
U2AF2P26368 MPHOSPH6-203ENST00000563504 617 ntTSL 2 BASIC12.06□□□□□ -0.485e-11■■□□□ 12.4
U2AF2P26368 MPHOSPH6-201ENST00000258169 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.615e-11■■□□□ 12.4
U2AF2P26368 MPHOSPH6-208ENST00000569599 619 ntTSL 210.44□□□□□ -0.745e-11■■□□□ 12.4
U2AF2P26368 SCLY-214ENST00000463433 916 ntTSL 59.25□□□□□ -0.933e-7■■□□□ 12.4
U2AF2P26368 GK-206ENST00000425166 371 ntTSL 52.81□□□□□ -1.963e-11■■□□□ 12.4
U2AF2P26368 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC30.27■■■□□ 2.442e-8■■□□□ 12.4
U2AF2P26368 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.522e-8■■□□□ 12.4
U2AF2P26368 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC23.62■■□□□ 1.372e-8■■□□□ 12.4
U2AF2P26368 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.212e-8■■□□□ 12.4
U2AF2P26368 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.852e-8■■□□□ 12.4
U2AF2P26368 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.632e-8■■□□□ 12.4
U2AF2P26368 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.42■□□□□ 0.542e-8■■□□□ 12.4
U2AF2P26368 YAP1-203ENST00000524575 1638 ntTSL 2 BASIC10.47□□□□□ -0.732e-8■■□□□ 12.4
U2AF2P26368 EXOSC10-211ENST00000498576 486 ntTSL 410.83□□□□□ -0.681e-6■■□□□ 12.4
U2AF2P26368 EXOSC10-205ENST00000470611 401 ntTSL 38.66□□□□□ -1.021e-6■■□□□ 12.4
U2AF2P26368 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.113e-7■■□□□ 12.4
U2AF2P26368 CNOT1-211ENST00000567188 7830 ntTSL 1 (best)6.74□□□□□ -1.333e-7■■□□□ 12.4
U2AF2P26368 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.63e-7■■□□□ 12.4
U2AF2P26368 ACSL4-210ENST00000505855 587 ntTSL 45.04□□□□□ -1.66e-11■■□□□ 12.4
U2AF2P26368 DUSP16-203ENST00000536236 258 ntTSL 36.62□□□□□ -1.351e-6■■□□□ 12.4
U2AF2P26368 DUSP16-204ENST00000539940 566 ntTSL 45.73□□□□□ -1.491e-6■■□□□ 12.4
U2AF2P26368 DUSP16-205ENST00000541207 585 ntTSL 45.27□□□□□ -1.571e-6■■□□□ 12.4
U2AF2P26368 BCL6-205ENST00000438077 709 ntTSL 323.33■■□□□ 1.332e-7■■□□□ 12.4
U2AF2P26368 CDHR3-207ENST00000470188 2199 ntTSL 223.3■■□□□ 1.322e-16■■□□□ 12.4
U2AF2P26368 CDHR3-209ENST00000472116 993 ntTSL 211.23□□□□□ -0.612e-16■■□□□ 12.4
U2AF2P26368 CDHR3-213ENST00000488386 540 ntTSL 36.51□□□□□ -1.372e-16■■□□□ 12.4
U2AF2P26368 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.54□□□□□ -1.682e-8■■□□□ 12.4
U2AF2P26368 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC24.2■■□□□ 1.463e-6■■□□□ 12.4
U2AF2P26368 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.153e-6■■□□□ 12.4
U2AF2P26368 ILKAP-204ENST00000463129 1861 ntTSL 221.1■□□□□ 0.973e-6■■□□□ 12.4
U2AF2P26368 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.68■□□□□ 0.93e-6■■□□□ 12.4
U2AF2P26368 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.181e-6■■□□□ 12.4
U2AF2P26368 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC13.35□□□□□ -0.271e-6■■□□□ 12.4
U2AF2P26368 DENND4C-204ENST00000380437 5963 ntTSL 54.18□□□□□ -1.741e-6■■□□□ 12.4
U2AF2P26368 DENND4C-206ENST00000494124 5335 ntTSL 1 (best)4.04□□□□□ -1.761e-6■■□□□ 12.4
U2AF2P26368 HTT-208ENST00000510626 14438 ntTSL 1 (best)9.28□□□□□ -0.926e-8■■□□□ 12.4
U2AF2P26368 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.016e-8■■□□□ 12.4
U2AF2P26368 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.668e-9■■□□□ 12.4
U2AF2P26368 DQX1-205ENST00000473508 2136 ntTSL 218.1■□□□□ 0.496e-9■■□□□ 12.4
U2AF2P26368 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.096e-9■■□□□ 12.4
Retrieved 100 of 36,523 protein–RNA pairs in 171.3 ms