RNA–Protein interactions for RNA: ENST00000577978.1

DDX42-205, Transcript of DEAD-box helicase 42, humanhuman

TSL 5

Gene DDX42, Length 581 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-205ENST00000577978 AEBP2Q6ZN18 517 aaPredicted RBP21.88■■□□□ 1.09
DDX42-205ENST00000577978 CHIC1Q5VXU3 224 aa20.55■□□□□ 0.88
DDX42-205ENST00000577978 SENP3Q9H4L4 574 aaPredicted RBP18.66■□□□□ 0.58
DDX42-205ENST00000577978 PHF23Q9BUL5 403 aaPredicted RBP18.42■□□□□ 0.54
DDX42-205ENST00000577978 FOXD1Q16676 465 aa17.47■□□□□ 0.39
DDX42-205ENST00000577978 POTEDQ86YR6 584 aa16.6■□□□□ 0.25
DDX42-205ENST00000577978 PLPPR3Q6T4P5 718 aa16.52■□□□□ 0.24
DDX42-205ENST00000577978 MSH5O43196 834 aa16.42■□□□□ 0.22
DDX42-205ENST00000577978 PIAS4Q8N2W9 510 aaPredicted RBP16.26■□□□□ 0.19
DDX42-205ENST00000577978 PPP6R1Q9UPN7 881 aa16.13■□□□□ 0.17
DDX42-205ENST00000577978 ADRA2BP18089 450 aa16.07■□□□□ 0.16
DDX42-205ENST00000577978 MAPK8IP2Q13387 824 aaPredicted RBP14.87□□□□□ -0.03
DDX42-205ENST00000577978 DMRT2Q9Y5R5 561 aa14.76□□□□□ -0.05
DDX42-205ENST00000577978 SCAF1Q9H7N4 1312 aaKnown RBP14.72□□□□□ -0.05
DDX42-205ENST00000577978 PPP4R3CPQ6ZMV5 832 aa14.45□□□□□ -0.1
DDX42-205ENST00000577978 CACNB1Q02641 598 aaPredicted RBP14.33□□□□□ -0.12
DDX42-205ENST00000577978 DCAF8L1A6NGE4 600 aa14.24□□□□□ -0.13
DDX42-205ENST00000577978 CNKSR2Q8WXI2 1034 aa14.19□□□□□ -0.14
DDX42-205ENST00000577978 HOXD11P31277 338 aaPredicted RBP14.09□□□□□ -0.15
DDX42-205ENST00000577978 RNF216Q9NWF9 866 aaPredicted RBP14.03□□□□□ -0.16
DDX42-205ENST00000577978 NCBP3Q53F19 620 aaKnown RBP14.02□□□□□ -0.17
DDX42-205ENST00000577978 RNF39Q9H2S5 420 aa14□□□□□ -0.17
DDX42-205ENST00000577978 C1QBPQ07021 282 aaKnown RBP13.76□□□□□ -0.21
DDX42-205ENST00000577978 NPM3O75607 178 aaKnown RBP13.73□□□□□ -0.21
DDX42-205ENST00000577978 DNAJC5BQ9UF47 199 aa13.65□□□□□ -0.22
DDX42-205ENST00000577978 KCNA4P22459 653 aa13.57□□□□□ -0.24
DDX42-205ENST00000577978 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.46□□□□□ -0.255e-13■■□□□ 11.4
DDX42-205ENST00000577978 U3KPZ7 1027 aaPredicted RBP13.14□□□□□ -0.31
DDX42-205ENST00000577978 SPINK5Q9NQ38 1064 aaPredicted RBP13.07□□□□□ -0.32
DDX42-205ENST00000577978 CAPN15O75808 1086 aa13.06□□□□□ -0.32
DDX42-205ENST00000577978 SLC4A2P04920 1241 aa13.05□□□□□ -0.32
DDX42-205ENST00000577978 DSG3P32926 999 aa13.03□□□□□ -0.32
DDX42-205ENST00000577978 POTEHQ6S545 545 aa12.94□□□□□ -0.34
DDX42-205ENST00000577978 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.91□□□□□ -0.34
DDX42-205ENST00000577978 APLP2Q06481 763 aa12.91□□□□□ -0.34
DDX42-205ENST00000577978 HNRNPUL2Q1KMD3 747 aaKnown RBP12.91□□□□□ -0.34
DDX42-205ENST00000577978 SLC4A1APQ9BWU0 796 aaKnown RBP12.89□□□□□ -0.35
DDX42-205ENST00000577978 SAMD1Q6SPF0 538 aaPredicted RBP12.82□□□□□ -0.36
DDX42-205ENST00000577978 TRHP20396 242 aaPredicted RBP12.78□□□□□ -0.36
DDX42-205ENST00000577978 MYCNP04198 464 aaPredicted RBP12.75□□□□□ -0.37
DDX42-205ENST00000577978 ABCB7O75027 752 aa12.74□□□□□ -0.37
DDX42-205ENST00000577978 ZNF219Q9P2Y4 722 aaPredicted RBP12.74□□□□□ -0.37
DDX42-205ENST00000577978 FOXD4L1Q9NU39 408 aa12.69□□□□□ -0.38
DDX42-205ENST00000577978 ZBTB22O15209 634 aa12.45□□□□□ -0.42
DDX42-205ENST00000577978 RBM42Q9BTD8 480 aaKnown RBP12.4□□□□□ -0.42
DDX42-205ENST00000577978 POLA2Q14181 598 aa12.38□□□□□ -0.43
DDX42-205ENST00000577978 ATXN8OSP0DMR3 200 aa12.33□□□□□ -0.44
DDX42-205ENST00000577978 ATF5Q9Y2D1 282 aaPredicted RBP12.33□□□□□ -0.44
DDX42-205ENST00000577978 CHRDL2Q6WN34 429 aa12.29□□□□□ -0.44
DDX42-205ENST00000577978 ZBTB12Q9Y330 459 aaPredicted RBP12.25□□□□□ -0.45
DDX42-205ENST00000577978 AKT1S1Q96B36 256 aa12.06□□□□□ -0.48
DDX42-205ENST00000577978 CSRNP3Q8WYN3 585 aa12.03□□□□□ -0.48
DDX42-205ENST00000577978 REM2Q8IYK8 340 aaPredicted RBP11.98□□□□□ -0.49
DDX42-205ENST00000577978 OSCARQ8IYS5 282 aa11.98□□□□□ -0.49
DDX42-205ENST00000577978 SP7Q8TDD2 431 aaPredicted RBP11.98□□□□□ -0.49
DDX42-205ENST00000577978 FBLN2P98095 1184 aa11.97□□□□□ -0.49
DDX42-205ENST00000577978 EHMT2Q96KQ7 1210 aa11.95□□□□□ -0.5
DDX42-205ENST00000577978 PIP4P2Q8N4L2 257 aa11.94□□□□□ -0.5
DDX42-205ENST00000577978 PITPNM1O00562 1244 aa11.86□□□□□ -0.51
DDX42-205ENST00000577978 SPDYE2BA6NHP3 402 aa11.84□□□□□ -0.51
DDX42-205ENST00000577978 SPDYE6P0CI01 402 aa11.84□□□□□ -0.51
DDX42-205ENST00000577978 SPDYE2Q495Y8 402 aa11.84□□□□□ -0.51
DDX42-205ENST00000577978 HAX1O00165 279 aa11.83□□□□□ -0.52
DDX42-205ENST00000577978 FXR2P51116 673 aaKnown RBP eCLIP11.8□□□□□ -0.52
DDX42-205ENST00000577978 MKRN4PQ13434 485 aaPredicted RBP11.8□□□□□ -0.52
DDX42-205ENST00000577978 ZNF692Q9BU19 519 aaPredicted RBP11.68□□□□□ -0.54
DDX42-205ENST00000577978 EVX2Q03828 476 aa11.67□□□□□ -0.54
DDX42-205ENST00000577978 SSUH2Q9Y2M2 353 aa11.67□□□□□ -0.54
DDX42-205ENST00000577978 SPDYE1Q8NFV5 336 aaPredicted RBP11.6□□□□□ -0.55
DDX42-205ENST00000577978 CLEC11AQ9Y240 323 aa11.57□□□□□ -0.56
DDX42-205ENST00000577978 PRKAR2AP13861 404 aaKnown RBP11.55□□□□□ -0.56
DDX42-205ENST00000577978 PABPN1Q86U42 306 aaKnown RBP eCLIP11.5□□□□□ -0.57
DDX42-205ENST00000577978 C19orf67A6NJJ6 358 aa11.43□□□□□ -0.58
DDX42-205ENST00000577978 CHADLQ6NUI6 762 aa11.39□□□□□ -0.59
DDX42-205ENST00000577978 SPDYE4A6NLX3 237 aa11.37□□□□□ -0.59
DDX42-205ENST00000577978 PRR29P0C7W0 189 aa11.37□□□□□ -0.59
DDX42-205ENST00000577978 GABBR2O75899 941 aa11.36□□□□□ -0.59
DDX42-205ENST00000577978 STAG3Q9UJ98 1225 aa11.3□□□□□ -0.6
DDX42-205ENST00000577978 LHX8Q68G74 356 aa11.25□□□□□ -0.61
DDX42-205ENST00000577978 CD44P16070 742 aaKnown RBP11.16□□□□□ -0.62
DDX42-205ENST00000577978 FARP1Q9Y4F1 1045 aaPredicted RBP11.15□□□□□ -0.62
DDX42-205ENST00000577978 PROM2Q8N271 834 aa11.13□□□□□ -0.63
DDX42-205ENST00000577978 POTEIP0CG38 1075 aa11.12□□□□□ -0.63
DDX42-205ENST00000577978 CREBZFQ9NS37 354 aa11.09□□□□□ -0.63
DDX42-205ENST00000577978 CLCN6P51797 869 aa11□□□□□ -0.65
DDX42-205ENST00000577978 DCBLD2Q96PD2 775 aa11□□□□□ -0.65
DDX42-205ENST00000577978 NPM1P06748 294 aaKnown RBP eCLIP10.97□□□□□ -0.65
DDX42-205ENST00000577978 ZRANB1Q9UGI0 708 aa10.97□□□□□ -0.65
DDX42-205ENST00000577978 ZNF579Q8NAF0 562 aaKnown RBP10.94□□□□□ -0.66
DDX42-205ENST00000577978 FKBP8Q14318 412 aa10.92□□□□□ -0.66
DDX42-205ENST00000577978 PAK3O75914 559 aaPredicted RBP10.91□□□□□ -0.66
DDX42-205ENST00000577978 MNX1P50219 401 aaPredicted RBP10.91□□□□□ -0.66
DDX42-205ENST00000577978 PLEKHG5O94827 1062 aa10.89□□□□□ -0.67
DDX42-205ENST00000577978 GALR2O43603 387 aaPredicted RBP10.88□□□□□ -0.67
DDX42-205ENST00000577978 MIER1Q8N108 512 aa10.83□□□□□ -0.68
DDX42-205ENST00000577978 PLSCR2Q9NRY7 297 aa10.82□□□□□ -0.68
DDX42-205ENST00000577978 PHF12Q96QT6 1004 aa10.8□□□□□ -0.68
DDX42-205ENST00000577978 PLCD3Q8N3E9 789 aa10.78□□□□□ -0.68
DDX42-205ENST00000577978 POTEB2H3BUK9 544 aa10.77□□□□□ -0.69
DDX42-205ENST00000577978 OTUD5Q96G74 571 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms