RNA–Protein interactions for RNA: ENST00000374018.5

SNRPC-203, Transcript of small nuclear ribonucleoprotein polypeptide C, humanhuman

TSL 5 BASIC

Gene SNRPC, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPC-203ENST00000374018 NISCHQ9Y2I1 1504 aa25.27■■□□□ 1.64
SNRPC-203ENST00000374018 CCDC180Q9P1Z9 1646 aa22.37■■□□□ 1.17
SNRPC-203ENST00000374018 ABCC9O60706 1549 aa22.02■■□□□ 1.12
SNRPC-203ENST00000374018 DCAF8L2P0C7V8 631 aa21.42■■□□□ 1.02
SNRPC-203ENST00000374018 RB1CC1Q8TDY2 1594 aa21.1■□□□□ 0.97
SNRPC-203ENST00000374018 NACADO15069 1562 aa21.06■□□□□ 0.96
SNRPC-203ENST00000374018 ZCCHC6Q5VYS8 1495 aaKnown RBP21.04■□□□□ 0.96
SNRPC-203ENST00000374018 MYO15BQ96JP2 1530 aa20.84■□□□□ 0.93
SNRPC-203ENST00000374018 DCAF1Q9Y4B6 1507 aa20.81■□□□□ 0.92
SNRPC-203ENST00000374018 PABPN1Q86U42 306 aaKnown RBP eCLIP20.66■□□□□ 0.9
SNRPC-203ENST00000374018 SCRIBQ14160 1630 aa20.59■□□□□ 0.89
SNRPC-203ENST00000374018 UNC13AQ9UPW8 1703 aa20.57■□□□□ 0.88
SNRPC-203ENST00000374018 BICRAQ9NZM4 1560 aa20.41■□□□□ 0.86
SNRPC-203ENST00000374018 SHROOM4Q9ULL8 1493 aa20.26■□□□□ 0.83
SNRPC-203ENST00000374018 DNAJC5BQ9UF47 199 aa20.11■□□□□ 0.81
SNRPC-203ENST00000374018 EIF4G1Q04637 1599 aaKnown RBP19.91■□□□□ 0.78
SNRPC-203ENST00000374018 CC2D2AQ9P2K1 1620 aa19.84■□□□□ 0.77
SNRPC-203ENST00000374018 CECR2Q9BXF3 1484 aa19.73■□□□□ 0.75
SNRPC-203ENST00000374018 SMARCA4P51532 1647 aa19.6■□□□□ 0.73
SNRPC-203ENST00000374018 BAZ1AQ9NRL2 1556 aaPredicted RBP19.59■□□□□ 0.73
SNRPC-203ENST00000374018 MROH2BQ7Z745 1585 aa19.52■□□□□ 0.71
SNRPC-203ENST00000374018 ATAD2BQ9ULI0 1458 aa19.48■□□□□ 0.71
SNRPC-203ENST00000374018 SMARCA2P51531 1590 aa19.46■□□□□ 0.71
SNRPC-203ENST00000374018 NCAPD3P42695 1498 aa19.42■□□□□ 0.7
SNRPC-203ENST00000374018 BAZ1BQ9UIG0 1483 aaKnown RBP19.39■□□□□ 0.69
SNRPC-203ENST00000374018 WIZO95785 1651 aa19.33■□□□□ 0.68
SNRPC-203ENST00000374018 RSF1Q96T23 1441 aaPredicted RBP19.32■□□□□ 0.68
SNRPC-203ENST00000374018 HMGXB3Q12766 1538 aa19.31■□□□□ 0.68
SNRPC-203ENST00000374018 PEG3Q9GZU2 1588 aa19.31■□□□□ 0.68
SNRPC-203ENST00000374018 SUPT5HO00267 1087 aaKnown RBP19.12■□□□□ 0.65
SNRPC-203ENST00000374018 TOP2AP11388 1531 aaKnown RBP19.09■□□□□ 0.65
SNRPC-203ENST00000374018 NESP48681 1621 aa19.04■□□□□ 0.64
SNRPC-203ENST00000374018 ERCC6Q03468 1493 aa19.01■□□□□ 0.63
SNRPC-203ENST00000374018 CADPSQ9ULU8 1353 aa18.93■□□□□ 0.62
SNRPC-203ENST00000374018 LAMC3Q9Y6N6 1575 aa18.92■□□□□ 0.62
SNRPC-203ENST00000374018 CCDC88BA6NC98 1476 aa18.9■□□□□ 0.62
SNRPC-203ENST00000374018 PDS5BQ9NTI5 1447 aa18.85■□□□□ 0.61
SNRPC-203ENST00000374018 CFTRP13569 1480 aa18.78■□□□□ 0.6
SNRPC-203ENST00000374018 KIF21AQ7Z4S6 1674 aa18.77■□□□□ 0.6
SNRPC-203ENST00000374018 FANCD2Q9BXW9 1451 aa18.73■□□□□ 0.59
SNRPC-203ENST00000374018 CEP164Q9UPV0 1460 aa18.71■□□□□ 0.59
SNRPC-203ENST00000374018 MRC2Q9UBG0 1479 aa18.65■□□□□ 0.58
SNRPC-203ENST00000374018 THOC2Q8NI27 1593 aaKnown RBP18.64■□□□□ 0.57
SNRPC-203ENST00000374018 CUX2O14529 1486 aa18.63■□□□□ 0.57
SNRPC-203ENST00000374018 PRDM2Q13029 1718 aa18.6■□□□□ 0.57
SNRPC-203ENST00000374018 WDR62O43379 1518 aa18.52■□□□□ 0.56
SNRPC-203ENST00000374018 URB2Q14146 1524 aaKnown RBP18.51■□□□□ 0.55
SNRPC-203ENST00000374018 TOPBP1Q92547 1522 aa18.41■□□□□ 0.54
SNRPC-203ENST00000374018 ABCC8Q09428 1581 aa18.38■□□□□ 0.53
SNRPC-203ENST00000374018 DNMBPQ6XZF7 1577 aa18.38■□□□□ 0.53
SNRPC-203ENST00000374018 CUX1P39880 1505 aa18.3■□□□□ 0.52
SNRPC-203ENST00000374018 IFT140Q96RY7 1462 aa18.28■□□□□ 0.52
SNRPC-203ENST00000374018 POLA1P09884 1462 aaPredicted RBP18.26■□□□□ 0.51
SNRPC-203ENST00000374018 FGD5Q6ZNL6 1462 aa18.26■□□□□ 0.51
SNRPC-203ENST00000374018 SOGA1O94964 1423 aa18.25■□□□□ 0.51
SNRPC-203ENST00000374018 WRNQ14191 1432 aaPredicted RBP eCLIP18.25■□□□□ 0.51
SNRPC-203ENST00000374018 RAD54L2Q9Y4B4 1467 aa18.25■□□□□ 0.51
SNRPC-203ENST00000374018 ZNF608Q9ULD9 1512 aaPredicted RBP18.22■□□□□ 0.51
SNRPC-203ENST00000374018 SYNJ1O43426 1573 aa18.17■□□□□ 0.5
SNRPC-203ENST00000374018 TDRD9Q8NDG6 1382 aaKnown RBP18.17■□□□□ 0.5
SNRPC-203ENST00000374018 AQRO60306 1485 aaKnown RBP eCLIP18.16■□□□□ 0.55e-8■■■■■ 32.2
SNRPC-203ENST00000374018 TARBP1Q13395 1621 aaKnown RBP18.16■□□□□ 0.5
SNRPC-203ENST00000374018 TOP2BQ02880 1626 aa18.13■□□□□ 0.49
SNRPC-203ENST00000374018 EIF4G3O43432 1585 aaKnown RBP18.13■□□□□ 0.49
SNRPC-203ENST00000374018 BIVM-ERCC5R4GMW8 1640 aa18.11■□□□□ 0.49
SNRPC-203ENST00000374018 FBLN2P98095 1184 aa18.09■□□□□ 0.49
SNRPC-203ENST00000374018 DNAJC5Q9H3Z4 198 aa18.04■□□□□ 0.48
SNRPC-203ENST00000374018 ABCA10Q8WWZ4 1543 aa18.02■□□□□ 0.47
SNRPC-203ENST00000374018 GAPVD1Q14C86 1478 aa18.01■□□□□ 0.47
SNRPC-203ENST00000374018 OSCARQ8IYS5 282 aa18■□□□□ 0.47
SNRPC-203ENST00000374018 TRIM41Q8WV44 630 aa18■□□□□ 0.47
SNRPC-203ENST00000374018 WDR97A6NE52 1622 aa18■□□□□ 0.47
SNRPC-203ENST00000374018 GRIN2BQ13224 1484 aa17.99■□□□□ 0.47
SNRPC-203ENST00000374018 SNAPC4Q5SXM2 1469 aa17.98■□□□□ 0.47
SNRPC-203ENST00000374018 CHMP7Q8WUX9 453 aaPredicted RBP17.97■□□□□ 0.47
SNRPC-203ENST00000374018 PBRM1Q86U86 1689 aa17.93■□□□□ 0.46
SNRPC-203ENST00000374018 ABCA5Q8WWZ7 1642 aa17.92■□□□□ 0.46
SNRPC-203ENST00000374018 CHD1O14646 1710 aa17.89■□□□□ 0.46
SNRPC-203ENST00000374018 MAGI1Q96QZ7 1491 aaPredicted RBP17.89■□□□□ 0.45
SNRPC-203ENST00000374018 KIF27Q86VH2 1401 aa17.88■□□□□ 0.45
SNRPC-203ENST00000374018 SYNJ2O15056 1496 aa17.84■□□□□ 0.45
SNRPC-203ENST00000374018 ERICH3Q5RHP9 1530 aa17.8■□□□□ 0.44
SNRPC-203ENST00000374018 FHAD1B1AJZ9 1412 aa17.79■□□□□ 0.44
SNRPC-203ENST00000374018 ADAMTS12P58397 1594 aa17.79■□□□□ 0.44
SNRPC-203ENST00000374018 IGF1RP08069 1367 aa17.76■□□□□ 0.43
SNRPC-203ENST00000374018 CHIC1Q5VXU3 224 aa17.75■□□□□ 0.43
SNRPC-203ENST00000374018 RUSC2Q8N2Y8 1516 aa17.75■□□□□ 0.43
SNRPC-203ENST00000374018 GRIN2AQ12879 1464 aa17.75■□□□□ 0.43
SNRPC-203ENST00000374018 FAM9AQ8IZU1 332 aaPredicted RBP17.73■□□□□ 0.43
SNRPC-203ENST00000374018 CARMIL1Q5VZK9 1371 aa17.7■□□□□ 0.42
SNRPC-203ENST00000374018 CUL7Q14999 1698 aa17.67■□□□□ 0.42
SNRPC-203ENST00000374018 CEP170Q5SW79 1584 aa17.65■□□□□ 0.42
SNRPC-203ENST00000374018 CLASP1Q7Z460 1538 aa17.64■□□□□ 0.41
SNRPC-203ENST00000374018 ARHGEF11O15085 1522 aa17.62■□□□□ 0.41
SNRPC-203ENST00000374018 RIMBP3CA6NJZ7 1639 aa17.62■□□□□ 0.41
SNRPC-203ENST00000374018 RIMBP3BA6NNM3 1639 aa17.62■□□□□ 0.41
SNRPC-203ENST00000374018 RIMBP3Q9UFD9 1639 aa17.62■□□□□ 0.41
SNRPC-203ENST00000374018 NUP160Q12769 1436 aa17.61■□□□□ 0.41
SNRPC-203ENST00000374018 CYB5RLQ6IPT4 315 aa17.6■□□□□ 0.41
SNRPC-203ENST00000374018 CSRNP3Q8WYN3 585 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms