RNA–Protein interactions for RNA: ENST00000624766.1

ATRX-218, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 2

Gene ATRX, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-218ENST00000624766 AEBP2Q6ZN18 517 aaPredicted RBP26.92■■□□□ 1.9
ATRX-218ENST00000624766 CHIC1Q5VXU3 224 aa25.33■■□□□ 1.65
ATRX-218ENST00000624766 SENP3Q9H4L4 574 aaPredicted RBP22.96■■□□□ 1.27
ATRX-218ENST00000624766 PHF23Q9BUL5 403 aaPredicted RBP22.67■■□□□ 1.22
ATRX-218ENST00000624766 FOXD1Q16676 465 aa21.46■■□□□ 1.03
ATRX-218ENST00000624766 PLPPR3Q6T4P5 718 aa20.16■□□□□ 0.82
ATRX-218ENST00000624766 MSH5O43196 834 aa20.11■□□□□ 0.81
ATRX-218ENST00000624766 PIAS4Q8N2W9 510 aaPredicted RBP20.08■□□□□ 0.81
ATRX-218ENST00000624766 POTEDQ86YR6 584 aa20.01■□□□□ 0.79
ATRX-218ENST00000624766 PPP6R1Q9UPN7 881 aa19.94■□□□□ 0.78
ATRX-218ENST00000624766 ADRA2BP18089 450 aa19.92■□□□□ 0.78
ATRX-218ENST00000624766 MAPK8IP2Q13387 824 aaPredicted RBP18.36■□□□□ 0.53
ATRX-218ENST00000624766 DMRT2Q9Y5R5 561 aa18.16■□□□□ 0.5
ATRX-218ENST00000624766 SCAF1Q9H7N4 1312 aaKnown RBP18.12■□□□□ 0.49
ATRX-218ENST00000624766 PPP4R3CPQ6ZMV5 832 aa17.69■□□□□ 0.42
ATRX-218ENST00000624766 DCAF8L1A6NGE4 600 aa17.66■□□□□ 0.42
ATRX-218ENST00000624766 CACNB1Q02641 598 aaPredicted RBP17.49■□□□□ 0.39
ATRX-218ENST00000624766 HOXD11P31277 338 aaPredicted RBP17.37■□□□□ 0.37
ATRX-218ENST00000624766 CNKSR2Q8WXI2 1034 aa17.35■□□□□ 0.37
ATRX-218ENST00000624766 RNF216Q9NWF9 866 aaPredicted RBP17.22■□□□□ 0.35
ATRX-218ENST00000624766 RNF39Q9H2S5 420 aa17.14■□□□□ 0.33
ATRX-218ENST00000624766 NCBP3Q53F19 620 aaKnown RBP16.93■□□□□ 0.3
ATRX-218ENST00000624766 C1QBPQ07021 282 aaKnown RBP16.86■□□□□ 0.29
ATRX-218ENST00000624766 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.72■□□□□ 0.276e-8■□□□□ 10.4
ATRX-218ENST00000624766 NPM3O75607 178 aaKnown RBP16.7■□□□□ 0.26
ATRX-218ENST00000624766 DNAJC5BQ9UF47 199 aa16.67■□□□□ 0.26
ATRX-218ENST00000624766 U3KPZ7 1027 aaPredicted RBP16.28■□□□□ 0.2
ATRX-218ENST00000624766 KCNA4P22459 653 aa16.26■□□□□ 0.19
ATRX-218ENST00000624766 CAPN15O75808 1086 aa16.18■□□□□ 0.18
ATRX-218ENST00000624766 SPINK5Q9NQ38 1064 aaPredicted RBP16.16■□□□□ 0.18
ATRX-218ENST00000624766 DSG3P32926 999 aa16.01■□□□□ 0.15
ATRX-218ENST00000624766 SLC4A2P04920 1241 aa15.98■□□□□ 0.15
ATRX-218ENST00000624766 TRHP20396 242 aaPredicted RBP15.89■□□□□ 0.13
ATRX-218ENST00000624766 ABCB7O75027 752 aa15.83■□□□□ 0.12
ATRX-218ENST00000624766 APLP2Q06481 763 aa15.75■□□□□ 0.11
ATRX-218ENST00000624766 ZNF219Q9P2Y4 722 aaPredicted RBP15.72■□□□□ 0.11
ATRX-218ENST00000624766 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.69■□□□□ 0.1
ATRX-218ENST00000624766 HNRNPUL2Q1KMD3 747 aaKnown RBP15.69■□□□□ 0.1
ATRX-218ENST00000624766 POTEHQ6S545 545 aa15.66■□□□□ 0.1
ATRX-218ENST00000624766 SAMD1Q6SPF0 538 aaPredicted RBP15.61■□□□□ 0.09
ATRX-218ENST00000624766 MYCNP04198 464 aaPredicted RBP15.43■□□□□ 0.06
ATRX-218ENST00000624766 POLA2Q14181 598 aa15.36■□□□□ 0.05
ATRX-218ENST00000624766 SLC4A1APQ9BWU0 796 aaKnown RBP15.32■□□□□ 0.04
ATRX-218ENST00000624766 RBM42Q9BTD8 480 aaKnown RBP15.27■□□□□ 0.04
ATRX-218ENST00000624766 FOXD4L1Q9NU39 408 aa15.18■□□□□ 0.02
ATRX-218ENST00000624766 ATF5Q9Y2D1 282 aaPredicted RBP15.16■□□□□ 0.02
ATRX-218ENST00000624766 CHRDL2Q6WN34 429 aa15.06■□□□□ 0
ATRX-218ENST00000624766 ZBTB12Q9Y330 459 aaPredicted RBP14.94□□□□□ -0.02
ATRX-218ENST00000624766 ZBTB22O15209 634 aa14.93□□□□□ -0.02
ATRX-218ENST00000624766 OSCARQ8IYS5 282 aa14.9□□□□□ -0.02
ATRX-218ENST00000624766 AKT1S1Q96B36 256 aa14.86□□□□□ -0.03
ATRX-218ENST00000624766 REM2Q8IYK8 340 aaPredicted RBP14.78□□□□□ -0.04
ATRX-218ENST00000624766 PIP4P2Q8N4L2 257 aa14.66□□□□□ -0.06
ATRX-218ENST00000624766 PITPNM1O00562 1244 aa14.65□□□□□ -0.06
ATRX-218ENST00000624766 ATXN8OSP0DMR3 200 aa14.63□□□□□ -0.07
ATRX-218ENST00000624766 FBLN2P98095 1184 aa14.57□□□□□ -0.08
ATRX-218ENST00000624766 SP7Q8TDD2 431 aaPredicted RBP14.57□□□□□ -0.08
ATRX-218ENST00000624766 HAX1O00165 279 aa14.52□□□□□ -0.09
ATRX-218ENST00000624766 SPDYE2BA6NHP3 402 aa14.47□□□□□ -0.09
ATRX-218ENST00000624766 SPDYE6P0CI01 402 aa14.47□□□□□ -0.09
ATRX-218ENST00000624766 FXR2P51116 673 aaKnown RBP eCLIP14.47□□□□□ -0.093e-12■■■□□ 18.9
ATRX-218ENST00000624766 SPDYE2Q495Y8 402 aa14.47□□□□□ -0.09
ATRX-218ENST00000624766 CLEC11AQ9Y240 323 aa14.42□□□□□ -0.1
ATRX-218ENST00000624766 MKRN4PQ13434 485 aaPredicted RBP14.41□□□□□ -0.1
ATRX-218ENST00000624766 ZNF692Q9BU19 519 aaPredicted RBP14.35□□□□□ -0.11
ATRX-218ENST00000624766 SPDYE1Q8NFV5 336 aaPredicted RBP14.3□□□□□ -0.12
ATRX-218ENST00000624766 PRKAR2AP13861 404 aaKnown RBP14.29□□□□□ -0.12
ATRX-218ENST00000624766 EVX2Q03828 476 aa14.29□□□□□ -0.12
ATRX-218ENST00000624766 SSUH2Q9Y2M2 353 aa14.23□□□□□ -0.13
ATRX-218ENST00000624766 CHADLQ6NUI6 762 aa14.15□□□□□ -0.14
ATRX-218ENST00000624766 PABPN1Q86U42 306 aaKnown RBP eCLIP14.15□□□□□ -0.14
ATRX-218ENST00000624766 PRR29P0C7W0 189 aa14.07□□□□□ -0.16
ATRX-218ENST00000624766 CSRNP3Q8WYN3 585 aa14.05□□□□□ -0.16
ATRX-218ENST00000624766 C19orf67A6NJJ6 358 aa14.03□□□□□ -0.16
ATRX-218ENST00000624766 EHMT2Q96KQ7 1210 aa13.94□□□□□ -0.18
ATRX-218ENST00000624766 GABBR2O75899 941 aa13.92□□□□□ -0.18
ATRX-218ENST00000624766 CD44P16070 742 aaKnown RBP13.83□□□□□ -0.2
ATRX-218ENST00000624766 FARP1Q9Y4F1 1045 aaPredicted RBP13.82□□□□□ -0.2
ATRX-218ENST00000624766 LHX8Q68G74 356 aa13.69□□□□□ -0.22
ATRX-218ENST00000624766 SPDYE4A6NLX3 237 aa13.67□□□□□ -0.22
ATRX-218ENST00000624766 CREBZFQ9NS37 354 aa13.63□□□□□ -0.23
ATRX-218ENST00000624766 ZRANB1Q9UGI0 708 aa13.63□□□□□ -0.23
ATRX-218ENST00000624766 POTEIP0CG38 1075 aa13.61□□□□□ -0.23
ATRX-218ENST00000624766 STAG3Q9UJ98 1225 aa13.61□□□□□ -0.23
ATRX-218ENST00000624766 DCBLD2Q96PD2 775 aa13.57□□□□□ -0.24
ATRX-218ENST00000624766 ZNF579Q8NAF0 562 aaKnown RBP13.52□□□□□ -0.25
ATRX-218ENST00000624766 GALR2O43603 387 aaPredicted RBP13.46□□□□□ -0.25
ATRX-218ENST00000624766 CLCN6P51797 869 aa13.46□□□□□ -0.25
ATRX-218ENST00000624766 PAK3O75914 559 aaPredicted RBP13.45□□□□□ -0.26
ATRX-218ENST00000624766 PHF12Q96QT6 1004 aa13.44□□□□□ -0.26
ATRX-218ENST00000624766 NPM1P06748 294 aaKnown RBP eCLIP13.38□□□□□ -0.27
ATRX-218ENST00000624766 MNX1P50219 401 aaPredicted RBP13.32□□□□□ -0.28
ATRX-218ENST00000624766 TSPYL2Q9H2G4 693 aaPredicted RBP13.25□□□□□ -0.29
ATRX-218ENST00000624766 MS4A3Q96HJ5 214 aa13.21□□□□□ -0.29
ATRX-218ENST00000624766 PELP1Q8IZL8 1130 aaKnown RBP13.2□□□□□ -0.3
ATRX-218ENST00000624766 POTEB2H3BUK9 544 aa13.19□□□□□ -0.3
ATRX-218ENST00000624766 OTUD5Q96G74 571 aa13.16□□□□□ -0.3
ATRX-218ENST00000624766 PROM2Q8N271 834 aa13.15□□□□□ -0.3
ATRX-218ENST00000624766 MIER1Q8N108 512 aa13.11□□□□□ -0.31
ATRX-218ENST00000624766 PLSCR2Q9NRY7 297 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms