RNA–Protein interactions for RNA: ENST00000614450.4

ACACA-233, Transcript of acetyl-CoA carboxylase alpha, human

TSL 4

Gene ACACA, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACACA-233	ENST00000614450	AEBP2	Q6ZN18	517 aa	Predicted RBP	22.41	■■□□□ 1.18
ACACA-233	ENST00000614450	CHIC1	Q5VXU3	224 aa		21.54	■■□□□ 1.04
ACACA-233	ENST00000614450	SENP3	Q9H4L4	574 aa	Predicted RBP	19.21	■□□□□ 0.67
ACACA-233	ENST00000614450	PHF23	Q9BUL5	403 aa	Predicted RBP	18.97	■□□□□ 0.63
ACACA-233	ENST00000614450	FOXD1	Q16676	465 aa		17.81	■□□□□ 0.44
ACACA-233	ENST00000614450	PLPPR3	Q6T4P5	718 aa		17.38	■□□□□ 0.37
ACACA-233	ENST00000614450	ADRA2B	P18089	450 aa		16.79	■□□□□ 0.28
ACACA-233	ENST00000614450	PPP6R1	Q9UPN7	881 aa		16.79	■□□□□ 0.28
ACACA-233	ENST00000614450	PIAS4	Q8N2W9	510 aa	Predicted RBP	16.75	■□□□□ 0.27
ACACA-233	ENST00000614450	MSH5	O43196	834 aa		16.68	■□□□□ 0.26
ACACA-233	ENST00000614450	POTED	Q86YR6	584 aa		15.84	■□□□□ 0.13
ACACA-233	ENST00000614450	SCAF1	Q9H7N4	1312 aa	Known RBP	15.51	■□□□□ 0.07
ACACA-233	ENST00000614450	MAPK8IP2	Q13387	824 aa	Predicted RBP	15.35	■□□□□ 0.05
ACACA-233	ENST00000614450	PPP4R3CP	Q6ZMV5	832 aa		15.24	■□□□□ 0.03
ACACA-233	ENST00000614450	DMRT2	Q9Y5R5	561 aa		15.22	■□□□□ 0.03
ACACA-233	ENST00000614450	CNKSR2	Q8WXI2	1034 aa		14.93	□□□□□ -0.02
ACACA-233	ENST00000614450	NCBP3	Q53F19	620 aa	Known RBP	14.81	□□□□□ -0.04
ACACA-233	ENST00000614450	HOXD11	P31277	338 aa	Predicted RBP	14.73	□□□□□ -0.05
ACACA-233	ENST00000614450	RNF216	Q9NWF9	866 aa	Predicted RBP	14.72	□□□□□ -0.05
ACACA-233	ENST00000614450	DCAF8L1	A6NGE4	600 aa		14.7	□□□□□ -0.06
ACACA-233	ENST00000614450	NPM3	O75607	178 aa	Known RBP	14.47	□□□□□ -0.09
ACACA-233	ENST00000614450	KCNA4	P22459	653 aa		14.37	□□□□□ -0.11
ACACA-233	ENST00000614450	CACNB1	Q02641	598 aa	Predicted RBP	14.21	□□□□□ -0.13
ACACA-233	ENST00000614450	DNAJC5B	Q9UF47	199 aa		14.21	□□□□□ -0.13
ACACA-233	ENST00000614450	RNF39	Q9H2S5	420 aa		14.18	□□□□□ -0.14
ACACA-233	ENST00000614450	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	14.15	□□□□□ -0.14
ACACA-233	ENST00000614450	C1QBP	Q07021	282 aa	Known RBP	14.05	□□□□□ -0.16
ACACA-233	ENST00000614450		U3KPZ7	1027 aa	Predicted RBP	13.75	□□□□□ -0.21
ACACA-233	ENST00000614450	SLC4A2	P04920	1241 aa		13.73	□□□□□ -0.21
ACACA-233	ENST00000614450	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.67	□□□□□ -0.22
ACACA-233	ENST00000614450	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	13.58	□□□□□ -0.24
ACACA-233	ENST00000614450	HNRNPUL2	Q1KMD3	747 aa	Known RBP	13.58	□□□□□ -0.24
ACACA-233	ENST00000614450	CAPN15	O75808	1086 aa		13.57	□□□□□ -0.24
ACACA-233	ENST00000614450	APLP2	Q06481	763 aa		13.57	□□□□□ -0.24
ACACA-233	ENST00000614450	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.51	□□□□□ -0.25
ACACA-233	ENST00000614450	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.48	□□□□□ -0.25
ACACA-233	ENST00000614450	MYCN	P04198	464 aa	Predicted RBP	13.42	□□□□□ -0.26
ACACA-233	ENST00000614450	TRH	P20396	242 aa	Predicted RBP	13.4	□□□□□ -0.26
ACACA-233	ENST00000614450	FOXD4L1	Q9NU39	408 aa		13.37	□□□□□ -0.27
ACACA-233	ENST00000614450	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.37	□□□□□ -0.27
ACACA-233	ENST00000614450	DSG3	P32926	999 aa		13.36	□□□□□ -0.27
ACACA-233	ENST00000614450	ABCB7	O75027	752 aa		13.21	□□□□□ -0.29
ACACA-233	ENST00000614450	ZBTB22	O15209	634 aa		13.13	□□□□□ -0.31
ACACA-233	ENST00000614450	POLA2	Q14181	598 aa		13.07	□□□□□ -0.32
ACACA-233	ENST00000614450	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.01	□□□□□ -0.33
ACACA-233	ENST00000614450	ATXN8OS	P0DMR3	200 aa		12.99	□□□□□ -0.33
ACACA-233	ENST00000614450	ZBTB12	Q9Y330	459 aa	Predicted RBP	12.86	□□□□□ -0.35
ACACA-233	ENST00000614450	RBM42	Q9BTD8	480 aa	Known RBP	12.83	□□□□□ -0.36
ACACA-233	ENST00000614450	CSRNP3	Q8WYN3	585 aa		12.79	□□□□□ -0.36
ACACA-233	ENST00000614450	EHMT2	Q96KQ7	1210 aa		12.78	□□□□□ -0.36
ACACA-233	ENST00000614450	FBLN2	P98095	1184 aa		12.66	□□□□□ -0.38
ACACA-233	ENST00000614450	OSCAR	Q8IYS5	282 aa		12.58	□□□□□ -0.4
ACACA-233	ENST00000614450	AKT1S1	Q96B36	256 aa		12.55	□□□□□ -0.4
ACACA-233	ENST00000614450	POTEH	Q6S545	545 aa		12.49	□□□□□ -0.41
ACACA-233	ENST00000614450	SPDYE2B	A6NHP3	402 aa		12.44	□□□□□ -0.42
ACACA-233	ENST00000614450	SPDYE6	P0CI01	402 aa		12.44	□□□□□ -0.42
ACACA-233	ENST00000614450	SPDYE2	Q495Y8	402 aa		12.44	□□□□□ -0.42
ACACA-233	ENST00000614450	MKRN4P	Q13434	485 aa	Predicted RBP	12.42	□□□□□ -0.42
ACACA-233	ENST00000614450	CHRDL2	Q6WN34	429 aa		12.41	□□□□□ -0.42
ACACA-233	ENST00000614450	REM2	Q8IYK8	340 aa	Predicted RBP	12.41	□□□□□ -0.42
ACACA-233	ENST00000614450	ZNF692	Q9BU19	519 aa	Predicted RBP	12.36	□□□□□ -0.43
ACACA-233	ENST00000614450	PITPNM1	O00562	1244 aa		12.24	□□□□□ -0.45
ACACA-233	ENST00000614450	SSUH2	Q9Y2M2	353 aa		12.22	□□□□□ -0.45
ACACA-233	ENST00000614450	SPDYE1	Q8NFV5	336 aa	Predicted RBP	12.2	□□□□□ -0.46
ACACA-233	ENST00000614450	CLEC11A	Q9Y240	323 aa		12.19	□□□□□ -0.46
ACACA-233	ENST00000614450	PABPN1	Q86U42	306 aa	Known RBP eCLIP	12.15	□□□□□ -0.46
ACACA-233	ENST00000614450	PIP4P2	Q8N4L2	257 aa		12.13	□□□□□ -0.47
ACACA-233	ENST00000614450	FXR2	P51116	673 aa	Known RBP eCLIP	12.1	□□□□□ -0.47
ACACA-233	ENST00000614450	SPDYE4	A6NLX3	237 aa		12.05	□□□□□ -0.48
ACACA-233	ENST00000614450	PRR29	P0C7W0	189 aa		12.02	□□□□□ -0.49
ACACA-233	ENST00000614450	PRKAR2A	P13861	404 aa	Known RBP	11.98	□□□□□ -0.49
ACACA-233	ENST00000614450	HAX1	O00165	279 aa		11.96	□□□□□ -0.49
ACACA-233	ENST00000614450	STAG3	Q9UJ98	1225 aa		11.93	□□□□□ -0.5
ACACA-233	ENST00000614450	CHADL	Q6NUI6	762 aa		11.85	□□□□□ -0.51
ACACA-233	ENST00000614450	SP7	Q8TDD2	431 aa	Predicted RBP	11.81	□□□□□ -0.52
ACACA-233	ENST00000614450	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.73	□□□□□ -0.53
ACACA-233	ENST00000614450	C19orf67	A6NJJ6	358 aa		11.7	□□□□□ -0.54
ACACA-233	ENST00000614450	EVX2	Q03828	476 aa		11.68	□□□□□ -0.54
ACACA-233	ENST00000614450	PROM2	Q8N271	834 aa		11.67	□□□□□ -0.54
ACACA-233	ENST00000614450	CREBZF	Q9NS37	354 aa		11.67	□□□□□ -0.54
ACACA-233	ENST00000614450	FKBP8	Q14318	412 aa		11.64	□□□□□ -0.55
ACACA-233	ENST00000614450	CD44	P16070	742 aa	Known RBP	11.61	□□□□□ -0.55
ACACA-233	ENST00000614450	NPM1	P06748	294 aa	Known RBP eCLIP	11.59	□□□□□ -0.55
ACACA-233	ENST00000614450	PLEKHG5	O94827	1062 aa		11.58	□□□□□ -0.56
ACACA-233	ENST00000614450	MIER1	Q8N108	512 aa		11.54	□□□□□ -0.56
ACACA-233	ENST00000614450	PAK3	O75914	559 aa	Predicted RBP	11.52	□□□□□ -0.57
ACACA-233	ENST00000614450	GABBR2	O75899	941 aa		11.5	□□□□□ -0.57
ACACA-233	ENST00000614450	CLCN6	P51797	869 aa		11.49	□□□□□ -0.57
ACACA-233	ENST00000614450	ZRANB1	Q9UGI0	708 aa		11.49	□□□□□ -0.57
ACACA-233	ENST00000614450	PLCD3	Q8N3E9	789 aa		11.46	□□□□□ -0.57
ACACA-233	ENST00000614450	MNX1	P50219	401 aa	Predicted RBP	11.45	□□□□□ -0.58
ACACA-233	ENST00000614450	FBXO3	Q9UK99	471 aa		11.43	□□□□□ -0.58
ACACA-233	ENST00000614450	ZNF579	Q8NAF0	562 aa	Known RBP	11.4	□□□□□ -0.58
ACACA-233	ENST00000614450	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.39	□□□□□ -0.59
ACACA-233	ENST00000614450	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.34	□□□□□ -0.59
ACACA-233	ENST00000614450	DCBLD2	Q96PD2	775 aa		11.33	□□□□□ -0.6
ACACA-233	ENST00000614450	PHF12	Q96QT6	1004 aa		11.29	□□□□□ -0.6
ACACA-233	ENST00000614450	GALR2	O43603	387 aa	Predicted RBP	11.24	□□□□□ -0.61
ACACA-233	ENST00000614450	RASEF	Q8IZ41	740 aa		11.22	□□□□□ -0.61
ACACA-233	ENST00000614450	KLHL34	Q8N239	644 aa		11.21	□□□□□ -0.61

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