RNA–Protein interactions for RNA: ENST00000579511.1

DDX42-209, Transcript of DEAD-box helicase 42, humanhuman

TSL 5

Gene DDX42, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-209ENST00000579511 AEBP2Q6ZN18 517 aaPredicted RBP25.74■■□□□ 1.71
DDX42-209ENST00000579511 CHIC1Q5VXU3 224 aa24.85■■□□□ 1.57
DDX42-209ENST00000579511 SENP3Q9H4L4 574 aaPredicted RBP21.86■■□□□ 1.09
DDX42-209ENST00000579511 PHF23Q9BUL5 403 aaPredicted RBP21.85■■□□□ 1.09
DDX42-209ENST00000579511 FOXD1Q16676 465 aa20.34■□□□□ 0.85
DDX42-209ENST00000579511 PLPPR3Q6T4P5 718 aa20.05■□□□□ 0.8
DDX42-209ENST00000579511 PPP6R1Q9UPN7 881 aa19.38■□□□□ 0.69
DDX42-209ENST00000579511 ADRA2BP18089 450 aa19.34■□□□□ 0.69
DDX42-209ENST00000579511 PIAS4Q8N2W9 510 aaPredicted RBP19.1■□□□□ 0.65
DDX42-209ENST00000579511 MSH5O43196 834 aa18.85■□□□□ 0.61
DDX42-209ENST00000579511 SCAF1Q9H7N4 1312 aaKnown RBP17.67■□□□□ 0.42
DDX42-209ENST00000579511 POTEDQ86YR6 584 aa17.66■□□□□ 0.42
DDX42-209ENST00000579511 MAPK8IP2Q13387 824 aaPredicted RBP17.64■□□□□ 0.41
DDX42-209ENST00000579511 PPP4R3CPQ6ZMV5 832 aa17.64■□□□□ 0.41
DDX42-209ENST00000579511 DMRT2Q9Y5R5 561 aa17.42■□□□□ 0.38
DDX42-209ENST00000579511 CNKSR2Q8WXI2 1034 aa17.2■□□□□ 0.34
DDX42-209ENST00000579511 NCBP3Q53F19 620 aaKnown RBP17.09■□□□□ 0.33
DDX42-209ENST00000579511 HOXD11P31277 338 aaPredicted RBP16.95■□□□□ 0.3
DDX42-209ENST00000579511 RNF216Q9NWF9 866 aaPredicted RBP16.94■□□□□ 0.3
DDX42-209ENST00000579511 KCNA4P22459 653 aa16.93■□□□□ 0.3
DDX42-209ENST00000579511 NPM3O75607 178 aaKnown RBP16.85■□□□□ 0.29
DDX42-209ENST00000579511 DCAF8L1A6NGE4 600 aa16.68■□□□□ 0.26
DDX42-209ENST00000579511 DNAJC5BQ9UF47 199 aa16.39■□□□□ 0.21
DDX42-209ENST00000579511 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.15■□□□□ 0.185e-13■■□□□ 11.4
DDX42-209ENST00000579511 RNF39Q9H2S5 420 aa16.14■□□□□ 0.17
DDX42-209ENST00000579511 SLC4A1APQ9BWU0 796 aaKnown RBP16.06■□□□□ 0.16
DDX42-209ENST00000579511 SLC4A2P04920 1241 aa15.99■□□□□ 0.15
DDX42-209ENST00000579511 C1QBPQ07021 282 aaKnown RBP15.93■□□□□ 0.14
DDX42-209ENST00000579511 CACNB1Q02641 598 aaPredicted RBP15.92■□□□□ 0.14
DDX42-209ENST00000579511 U3KPZ7 1027 aaPredicted RBP15.86■□□□□ 0.13
DDX42-209ENST00000579511 FOXD4L1Q9NU39 408 aa15.64■□□□□ 0.09
DDX42-209ENST00000579511 ZBTB22O15209 634 aa15.58■□□□□ 0.08
DDX42-209ENST00000579511 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.55■□□□□ 0.08
DDX42-209ENST00000579511 MYCNP04198 464 aaPredicted RBP15.55■□□□□ 0.08
DDX42-209ENST00000579511 HNRNPUL2Q1KMD3 747 aaKnown RBP15.55■□□□□ 0.08
DDX42-209ENST00000579511 SPINK5Q9NQ38 1064 aaPredicted RBP15.51■□□□□ 0.07
DDX42-209ENST00000579511 SAMD1Q6SPF0 538 aaPredicted RBP15.49■□□□□ 0.07
DDX42-209ENST00000579511 CAPN15O75808 1086 aa15.45■□□□□ 0.06
DDX42-209ENST00000579511 APLP2Q06481 763 aa15.44■□□□□ 0.06
DDX42-209ENST00000579511 TRHP20396 242 aaPredicted RBP15.31■□□□□ 0.04
DDX42-209ENST00000579511 EHMT2Q96KQ7 1210 aa15.29■□□□□ 0.04
DDX42-209ENST00000579511 ZNF219Q9P2Y4 722 aaPredicted RBP15.28■□□□□ 0.04
DDX42-209ENST00000579511 DSG3P32926 999 aa15.26■□□□□ 0.03
DDX42-209ENST00000579511 CSRNP3Q8WYN3 585 aa15.26■□□□□ 0.03
DDX42-209ENST00000579511 ATF5Q9Y2D1 282 aaPredicted RBP15.2■□□□□ 0.02
DDX42-209ENST00000579511 ABCB7O75027 752 aa15.13■□□□□ 0.01
DDX42-209ENST00000579511 ATXN8OSP0DMR3 200 aa15.12■□□□□ 0.01
DDX42-209ENST00000579511 POLA2Q14181 598 aa15.02■□□□□ -0
DDX42-209ENST00000579511 ZBTB12Q9Y330 459 aaPredicted RBP14.72□□□□□ -0.05
DDX42-209ENST00000579511 FBLN2P98095 1184 aa14.55□□□□□ -0.08
DDX42-209ENST00000579511 MKRN4PQ13434 485 aaPredicted RBP14.52□□□□□ -0.09
DDX42-209ENST00000579511 RBM42Q9BTD8 480 aaKnown RBP14.52□□□□□ -0.09
DDX42-209ENST00000579511 OSCARQ8IYS5 282 aa14.5□□□□□ -0.09
DDX42-209ENST00000579511 AKT1S1Q96B36 256 aa14.3□□□□□ -0.12
DDX42-209ENST00000579511 SPDYE2BA6NHP3 402 aa14.29□□□□□ -0.12
DDX42-209ENST00000579511 SPDYE6P0CI01 402 aa14.29□□□□□ -0.12
DDX42-209ENST00000579511 SPDYE2Q495Y8 402 aa14.29□□□□□ -0.12
DDX42-209ENST00000579511 ZNF692Q9BU19 519 aaPredicted RBP14.22□□□□□ -0.13
DDX42-209ENST00000579511 REM2Q8IYK8 340 aaPredicted RBP14.18□□□□□ -0.14
DDX42-209ENST00000579511 SSUH2Q9Y2M2 353 aa14.17□□□□□ -0.14
DDX42-209ENST00000579511 CHRDL2Q6WN34 429 aa14.06□□□□□ -0.16
DDX42-209ENST00000579511 SPDYE4A6NLX3 237 aa14.05□□□□□ -0.16
DDX42-209ENST00000579511 PABPN1Q86U42 306 aaKnown RBP eCLIP14.02□□□□□ -0.17
DDX42-209ENST00000579511 PITPNM1O00562 1244 aa14.01□□□□□ -0.17
DDX42-209ENST00000579511 SPDYE1Q8NFV5 336 aaPredicted RBP13.95□□□□□ -0.18
DDX42-209ENST00000579511 POTEHQ6S545 545 aa13.93□□□□□ -0.18
DDX42-209ENST00000579511 CLEC11AQ9Y240 323 aa13.91□□□□□ -0.18
DDX42-209ENST00000579511 PIP4P2Q8N4L2 257 aa13.82□□□□□ -0.2
DDX42-209ENST00000579511 FXR2P51116 673 aaKnown RBP eCLIP13.81□□□□□ -0.2
DDX42-209ENST00000579511 FKBP8Q14318 412 aa13.79□□□□□ -0.2
DDX42-209ENST00000579511 PROM2Q8N271 834 aa13.77□□□□□ -0.21
DDX42-209ENST00000579511 PRR29P0C7W0 189 aa13.75□□□□□ -0.21
DDX42-209ENST00000579511 STAG3Q9UJ98 1225 aa13.71□□□□□ -0.21
DDX42-209ENST00000579511 PRKAR2AP13861 404 aaKnown RBP13.66□□□□□ -0.22
DDX42-209ENST00000579511 CHADLQ6NUI6 762 aa13.6□□□□□ -0.23
DDX42-209ENST00000579511 CREBZFQ9NS37 354 aa13.51□□□□□ -0.25
DDX42-209ENST00000579511 FARP1Q9Y4F1 1045 aaPredicted RBP13.46□□□□□ -0.25
DDX42-209ENST00000579511 HAX1O00165 279 aa13.45□□□□□ -0.26
DDX42-209ENST00000579511 FBXO3Q9UK99 471 aa13.38□□□□□ -0.27
DDX42-209ENST00000579511 MIER1Q8N108 512 aa13.37□□□□□ -0.27
DDX42-209ENST00000579511 C19orf67A6NJJ6 358 aa13.35□□□□□ -0.27
DDX42-209ENST00000579511 MNX1P50219 401 aaPredicted RBP13.35□□□□□ -0.27
DDX42-209ENST00000579511 EVX2Q03828 476 aa13.34□□□□□ -0.27
DDX42-209ENST00000579511 PLCD3Q8N3E9 789 aa13.29□□□□□ -0.28
DDX42-209ENST00000579511 PLEKHG5O94827 1062 aa13.28□□□□□ -0.28
DDX42-209ENST00000579511 NPM1P06748 294 aaKnown RBP eCLIP13.26□□□□□ -0.29
DDX42-209ENST00000579511 SP7Q8TDD2 431 aaPredicted RBP13.26□□□□□ -0.29
DDX42-209ENST00000579511 CD44P16070 742 aaKnown RBP13.25□□□□□ -0.29
DDX42-209ENST00000579511 VASPP50552 380 aaPredicted RBP13.2□□□□□ -0.3
DDX42-209ENST00000579511 ZBTB47Q9UFB7 747 aaPredicted RBP13.16□□□□□ -0.3
DDX42-209ENST00000579511 ZRANB1Q9UGI0 708 aa13.14□□□□□ -0.31
DDX42-209ENST00000579511 PAK3O75914 559 aaPredicted RBP13.1□□□□□ -0.31
DDX42-209ENST00000579511 RASEFQ8IZ41 740 aa13.06□□□□□ -0.32
DDX42-209ENST00000579511 ZNF579Q8NAF0 562 aaKnown RBP13.06□□□□□ -0.32
DDX42-209ENST00000579511 GABBR2O75899 941 aa13.05□□□□□ -0.32
DDX42-209ENST00000579511 NUBP1P53384 320 aa13.05□□□□□ -0.32
DDX42-209ENST00000579511 KLHL34Q8N239 644 aa13.05□□□□□ -0.32
DDX42-209ENST00000579511 TSPYL2Q9H2G4 693 aaPredicted RBP13.05□□□□□ -0.32
DDX42-209ENST00000579511 IFNLR1Q8IU57 520 aaPredicted RBP13.03□□□□□ -0.32
DDX42-209ENST00000579511 PHF12Q96QT6 1004 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms