RNA–Protein interactions for RNA: ENST00000484213.1

ABCD3-205, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best)

Gene ABCD3, Length 4,367 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-205ENST00000484213 CHIC1Q5VXU3 224 aa9.94□□□□□ -0.82
ABCD3-205ENST00000484213 AEBP2Q6ZN18 517 aaPredicted RBP9.54□□□□□ -0.88
ABCD3-205ENST00000484213 NISCHQ9Y2I1 1504 aa9.25□□□□□ -0.93
ABCD3-205ENST00000484213 EHMT2Q96KQ7 1210 aa8.82□□□□□ -1
ABCD3-205ENST00000484213 PLPPR3Q6T4P5 718 aa8.67□□□□□ -1.02
ABCD3-205ENST00000484213 SENP3Q9H4L4 574 aaPredicted RBP8.61□□□□□ -1.03
ABCD3-205ENST00000484213 PHF23Q9BUL5 403 aaPredicted RBP8.6□□□□□ -1.03
ABCD3-205ENST00000484213 CCDC180Q9P1Z9 1646 aa8.49□□□□□ -1.05
ABCD3-205ENST00000484213 ABCC9O60706 1549 aa8.24□□□□□ -1.09
ABCD3-205ENST00000484213 RB1CC1Q8TDY2 1594 aa8.19□□□□□ -1.1
ABCD3-205ENST00000484213 DCAF8L2P0C7V8 631 aa8.13□□□□□ -1.11
ABCD3-205ENST00000484213 NACADO15069 1562 aa8.13□□□□□ -1.11
ABCD3-205ENST00000484213 SHROOM4Q9ULL8 1493 aa8.1□□□□□ -1.11
ABCD3-205ENST00000484213 ADRA2BP18089 450 aa8.07□□□□□ -1.12
ABCD3-205ENST00000484213 MYO15BQ96JP2 1530 aa8.05□□□□□ -1.12
ABCD3-205ENST00000484213 SLC4A1APQ9BWU0 796 aaKnown RBP8.03□□□□□ -1.12
ABCD3-205ENST00000484213 NCBP3Q53F19 620 aaKnown RBP8□□□□□ -1.13
ABCD3-205ENST00000484213 PIAS4Q8N2W9 510 aaPredicted RBP7.99□□□□□ -1.13
ABCD3-205ENST00000484213 KCNA4P22459 653 aa7.97□□□□□ -1.13
ABCD3-205ENST00000484213 DCAF8L1A6NGE4 600 aa7.94□□□□□ -1.14
ABCD3-205ENST00000484213 DCAF1Q9Y4B6 1507 aa7.87□□□□□ -1.15
ABCD3-205ENST00000484213 SCAF1Q9H7N4 1312 aaKnown RBP7.76□□□□□ -1.17
ABCD3-205ENST00000484213 PPP4R3CPQ6ZMV5 832 aa7.69□□□□□ -1.18
ABCD3-205ENST00000484213 FOXD1Q16676 465 aa7.67□□□□□ -1.18
ABCD3-205ENST00000484213 ZCCHC6Q5VYS8 1495 aaKnown RBP7.64□□□□□ -1.19
ABCD3-205ENST00000484213 PPP6R1Q9UPN7 881 aa7.63□□□□□ -1.19
ABCD3-205ENST00000484213 PABPN1Q86U42 306 aaKnown RBP eCLIP7.6□□□□□ -1.19
ABCD3-205ENST00000484213 CECR2Q9BXF3 1484 aa7.59□□□□□ -1.19
ABCD3-205ENST00000484213 SLC24A1O60721 1099 aa7.55□□□□□ -1.2
ABCD3-205ENST00000484213 SCRIBQ14160 1630 aa7.53□□□□□ -1.2
ABCD3-205ENST00000484213 SMARCA2P51531 1590 aa7.51□□□□□ -1.21
ABCD3-205ENST00000484213 CUX2O14529 1486 aa7.5□□□□□ -1.21
ABCD3-205ENST00000484213 ERCC6Q03468 1493 aa7.5□□□□□ -1.21
ABCD3-205ENST00000484213 FAM9AQ8IZU1 332 aaPredicted RBP7.48□□□□□ -1.21
ABCD3-205ENST00000484213 EIF4G1Q04637 1599 aaKnown RBP7.45□□□□□ -1.22
ABCD3-205ENST00000484213 PDS5BQ9NTI5 1447 aa7.44□□□□□ -1.22
ABCD3-205ENST00000484213 FKBP8Q14318 412 aa7.44□□□□□ -1.22
ABCD3-205ENST00000484213 CSRNP3Q8WYN3 585 aa7.42□□□□□ -1.22
ABCD3-205ENST00000484213 CC2D2AQ9P2K1 1620 aa7.41□□□□□ -1.22
ABCD3-205ENST00000484213 KLHL34Q8N239 644 aa7.4□□□□□ -1.22
ABCD3-205ENST00000484213 BAZ1AQ9NRL2 1556 aaPredicted RBP7.38□□□□□ -1.23
ABCD3-205ENST00000484213 NCAPD3P42695 1498 aa7.38□□□□□ -1.23
ABCD3-205ENST00000484213 BICRAQ9NZM4 1560 aa7.37□□□□□ -1.23
ABCD3-205ENST00000484213 HMGXB3Q12766 1538 aa7.37□□□□□ -1.23
ABCD3-205ENST00000484213 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.36□□□□□ -1.232e-6■□□□□ 10.6
ABCD3-205ENST00000484213 BAZ1BQ9UIG0 1483 aaKnown RBP7.35□□□□□ -1.23
ABCD3-205ENST00000484213 HAP1P54257 671 aaPredicted RBP7.33□□□□□ -1.24
ABCD3-205ENST00000484213 AMER1Q5JTC6 1135 aaPredicted RBP7.32□□□□□ -1.24
ABCD3-205ENST00000484213 ABCC8Q09428 1581 aa7.31□□□□□ -1.24
ABCD3-205ENST00000484213 DNAJC5BQ9UF47 199 aa7.3□□□□□ -1.24
ABCD3-205ENST00000484213 DNAJC5Q9H3Z4 198 aa7.29□□□□□ -1.24
ABCD3-205ENST00000484213 LAMC3Q9Y6N6 1575 aa7.29□□□□□ -1.24
ABCD3-205ENST00000484213 NPM3O75607 178 aaKnown RBP7.29□□□□□ -1.24
ABCD3-205ENST00000484213 FOXD4L1Q9NU39 408 aa7.28□□□□□ -1.24
ABCD3-205ENST00000484213 UNC13AQ9UPW8 1703 aa7.28□□□□□ -1.24
ABCD3-205ENST00000484213 CNKSR2Q8WXI2 1034 aa7.27□□□□□ -1.25
ABCD3-205ENST00000484213 ATP1B4Q9UN42 357 aaPredicted RBP7.27□□□□□ -1.25
ABCD3-205ENST00000484213 RTN4Q9NQC3 1192 aaKnown RBP7.23□□□□□ -1.25
ABCD3-205ENST00000484213 ATAD2BQ9ULI0 1458 aa7.23□□□□□ -1.25
ABCD3-205ENST00000484213 CADPSQ9ULU8 1353 aa7.2□□□□□ -1.26
ABCD3-205ENST00000484213 MRC2Q9UBG0 1479 aa7.2□□□□□ -1.26
ABCD3-205ENST00000484213 CEP164Q9UPV0 1460 aa7.19□□□□□ -1.26
ABCD3-205ENST00000484213 MSH5O43196 834 aa7.19□□□□□ -1.26
ABCD3-205ENST00000484213 OSCARQ8IYS5 282 aa7.18□□□□□ -1.26
ABCD3-205ENST00000484213 SMARCA4P51532 1647 aa7.18□□□□□ -1.26
ABCD3-205ENST00000484213 PLEKHG5O94827 1062 aa7.17□□□□□ -1.26
ABCD3-205ENST00000484213 PEG3Q9GZU2 1588 aa7.16□□□□□ -1.26
ABCD3-205ENST00000484213 CFAP44Q96MT7 982 aa7.14□□□□□ -1.27
ABCD3-205ENST00000484213 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.14□□□□□ -1.27
ABCD3-205ENST00000484213 TRHP20396 242 aaPredicted RBP7.13□□□□□ -1.27
ABCD3-205ENST00000484213 PLCD3Q8N3E9 789 aa7.13□□□□□ -1.27
ABCD3-205ENST00000484213 NPM1P06748 294 aaKnown RBP eCLIP7.11□□□□□ -1.27
ABCD3-205ENST00000484213 MAPK8IP2Q13387 824 aaPredicted RBP7.11□□□□□ -1.27
ABCD3-205ENST00000484213 IFT140Q96RY7 1462 aa7.1□□□□□ -1.27
ABCD3-205ENST00000484213 WDR97A6NE52 1622 aa7.09□□□□□ -1.27
ABCD3-205ENST00000484213 MYT1LQ9UL68 1186 aa7.07□□□□□ -1.28
ABCD3-205ENST00000484213 CIZ1Q9ULV3 898 aaPredicted RBP7.07□□□□□ -1.28
ABCD3-205ENST00000484213 NBR1Q14596 966 aa7.05□□□□□ -1.28
ABCD3-205ENST00000484213 FANCD2Q9BXW9 1451 aa7.04□□□□□ -1.28
ABCD3-205ENST00000484213 TOP2AP11388 1531 aaKnown RBP7.03□□□□□ -1.28
ABCD3-205ENST00000484213 APLP2Q06481 763 aa7.03□□□□□ -1.28
ABCD3-205ENST00000484213 CAPN15O75808 1086 aa7.02□□□□□ -1.29
ABCD3-205ENST00000484213 WDR62O43379 1518 aa7.01□□□□□ -1.29
ABCD3-205ENST00000484213 FBLN2P98095 1184 aa7.01□□□□□ -1.29
ABCD3-205ENST00000484213 CHMP7Q8WUX9 453 aaPredicted RBP7.01□□□□□ -1.29
ABCD3-205ENST00000484213 CFTRP13569 1480 aa7□□□□□ -1.29
ABCD3-205ENST00000484213 RSF1Q96T23 1441 aaPredicted RBP7□□□□□ -1.29
ABCD3-205ENST00000484213 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.99□□□□□ -1.29
ABCD3-205ENST00000484213 HNRNPUL2Q1KMD3 747 aaKnown RBP6.99□□□□□ -1.29
ABCD3-205ENST00000484213 TRIM41Q8WV44 630 aa6.99□□□□□ -1.29
ABCD3-205ENST00000484213 FBXO3Q9UK99 471 aa6.99□□□□□ -1.29
ABCD3-205ENST00000484213 MYCNP04198 464 aaPredicted RBP6.96□□□□□ -1.3
ABCD3-205ENST00000484213 SYNJ1O43426 1573 aa6.94□□□□□ -1.3
ABCD3-205ENST00000484213 MIER1Q8N108 512 aa6.93□□□□□ -1.3
ABCD3-205ENST00000484213 MROH2BQ7Z745 1585 aa6.93□□□□□ -1.3
ABCD3-205ENST00000484213 MAGI1Q96QZ7 1491 aaPredicted RBP6.93□□□□□ -1.3
ABCD3-205ENST00000484213 DNMBPQ6XZF7 1577 aa6.92□□□□□ -1.3
ABCD3-205ENST00000484213 THOC2Q8NI27 1593 aaKnown RBP6.92□□□□□ -1.3
ABCD3-205ENST00000484213 GRIN2BQ13224 1484 aa6.9□□□□□ -1.3
ABCD3-205ENST00000484213 PAXIP1Q6ZW49 1069 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms