Protein–RNA interactions for Protein: P11047

LAMC1, Laminin subunit gamma-1, humanhuman

Predictions only

Length 1,609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMC1P11047 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LAMC1P11047 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LAMC1P11047 AC068760.1-201ENST00000493579 1953 ntBASIC20.01■□□□□ 0.79
LAMC1P11047 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LAMC1P11047 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LAMC1P11047 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LAMC1P11047 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
LAMC1P11047 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
LAMC1P11047 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
LAMC1P11047 SURF4-203ENST00000371991 715 ntTSL 3 BASIC20.01■□□□□ 0.79
LAMC1P11047 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LAMC1P11047 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC20.01■□□□□ 0.79
LAMC1P11047 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LAMC1P11047 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
LAMC1P11047 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC20.01■□□□□ 0.79
LAMC1P11047 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC20.01■□□□□ 0.79
LAMC1P11047 GNG10P1-201ENST00000452289 199 ntBASIC20.01■□□□□ 0.79
LAMC1P11047 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
LAMC1P11047 PDXDC2P-206ENST00000534700 1315 ntBASIC20.01■□□□□ 0.79
LAMC1P11047 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LAMC1P11047 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC20.01■□□□□ 0.79
LAMC1P11047 AL139158.3-201ENST00000641212 1562 ntBASIC20.01■□□□□ 0.79
LAMC1P11047 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC20■□□□□ 0.79
LAMC1P11047 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
LAMC1P11047 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
LAMC1P11047 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC20■□□□□ 0.79
LAMC1P11047 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
LAMC1P11047 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC20■□□□□ 0.79
LAMC1P11047 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
LAMC1P11047 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LAMC1P11047 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LAMC1P11047 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC20■□□□□ 0.79
LAMC1P11047 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC20■□□□□ 0.79
LAMC1P11047 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC20■□□□□ 0.79
LAMC1P11047 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC20■□□□□ 0.79
LAMC1P11047 RPL35P9-201ENST00000446059 350 ntBASIC20■□□□□ 0.79
LAMC1P11047 AC026470.1-201ENST00000478038 846 ntBASIC20■□□□□ 0.79
LAMC1P11047 FAM86B3P-203ENST00000523992 854 ntBASIC20■□□□□ 0.79
LAMC1P11047 AC226150.1-201ENST00000544259 466 ntBASIC20■□□□□ 0.79
LAMC1P11047 AC013553.1-201ENST00000560906 267 ntBASIC20■□□□□ 0.79
LAMC1P11047 USB1-205ENST00000561743 1135 ntTSL 3 BASIC20■□□□□ 0.79
LAMC1P11047 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC20■□□□□ 0.79
LAMC1P11047 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC20■□□□□ 0.79
LAMC1P11047 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC20■□□□□ 0.79
LAMC1P11047 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LAMC1P11047 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
LAMC1P11047 DBET-201ENST00000630918 3363 ntBASIC20■□□□□ 0.79
LAMC1P11047 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC20■□□□□ 0.79
LAMC1P11047 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LAMC1P11047 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
LAMC1P11047 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
LAMC1P11047 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LAMC1P11047 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LAMC1P11047 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC20■□□□□ 0.79
LAMC1P11047 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
LAMC1P11047 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC19.99■□□□□ 0.79
LAMC1P11047 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LAMC1P11047 USP39-207ENST00000450066 2086 ntTSL 2 BASIC19.99■□□□□ 0.79
LAMC1P11047 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
LAMC1P11047 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LAMC1P11047 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LAMC1P11047 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LAMC1P11047 AL357373.1-201ENST00000394974 322 ntBASIC19.99■□□□□ 0.79
LAMC1P11047 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC19.99■□□□□ 0.79
LAMC1P11047 GOLGA2P8-201ENST00000505201 779 ntBASIC19.99■□□□□ 0.79
LAMC1P11047 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC19.99■□□□□ 0.79
LAMC1P11047 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LAMC1P11047 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
LAMC1P11047 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LAMC1P11047 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LAMC1P11047 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LAMC1P11047 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LAMC1P11047 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
LAMC1P11047 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
LAMC1P11047 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC19.99■□□□□ 0.79
LAMC1P11047 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
LAMC1P11047 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC19.99■□□□□ 0.79
LAMC1P11047 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC19.99■□□□□ 0.79
LAMC1P11047 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC19.99■□□□□ 0.79
LAMC1P11047 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
LAMC1P11047 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
LAMC1P11047 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
LAMC1P11047 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
LAMC1P11047 OR52M2P-201ENST00000414298 959 ntBASIC19.98■□□□□ 0.79
LAMC1P11047 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC19.98■□□□□ 0.79
LAMC1P11047 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC19.98■□□□□ 0.79
LAMC1P11047 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC19.98■□□□□ 0.79
LAMC1P11047 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC19.98■□□□□ 0.79
LAMC1P11047 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC19.98■□□□□ 0.79
LAMC1P11047 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LAMC1P11047 VENTXP3-201ENST00000546480 773 ntBASIC19.98■□□□□ 0.79
LAMC1P11047 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
LAMC1P11047 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC19.98■□□□□ 0.79
LAMC1P11047 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC19.98■□□□□ 0.79
LAMC1P11047 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LAMC1P11047 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
LAMC1P11047 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
LAMC1P11047 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LAMC1P11047 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LAMC1P11047 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms