Protein–RNA interactions for Protein: P07333

CSF1R, Macrophage colony-stimulating factor 1 receptor, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1RP07333 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CSF1RP07333 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CSF1RP07333 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
CSF1RP07333 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSF1RP07333 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CSF1RP07333 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSF1RP07333 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CSF1RP07333 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSF1RP07333 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSF1RP07333 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CSF1RP07333 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSF1RP07333 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSF1RP07333 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSF1RP07333 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
CSF1RP07333 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSF1RP07333 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CSF1RP07333 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CSF1RP07333 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSF1RP07333 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSF1RP07333 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CSF1RP07333 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC17.61■□□□□ 0.41
CSF1RP07333 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSF1RP07333 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC17.61■□□□□ 0.41
CSF1RP07333 CELP-201ENST00000411440 1249 ntTSL 5 BASIC17.61■□□□□ 0.41
CSF1RP07333 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CSF1RP07333 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC17.61■□□□□ 0.41
CSF1RP07333 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CSF1RP07333 CSNK1G2P1-201ENST00000442675 955 ntBASIC17.61■□□□□ 0.41
CSF1RP07333 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC17.61■□□□□ 0.41
CSF1RP07333 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC17.61■□□□□ 0.41
CSF1RP07333 GOLGA2P8-201ENST00000505201 779 ntBASIC17.61■□□□□ 0.41
CSF1RP07333 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC17.61■□□□□ 0.41
CSF1RP07333 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSF1RP07333 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSF1RP07333 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC17.61■□□□□ 0.41
CSF1RP07333 RN7SL470P-201ENST00000583069 259 ntBASIC17.61■□□□□ 0.41
CSF1RP07333 AL161773.1-201ENST00000624845 863 ntBASIC17.61■□□□□ 0.41
CSF1RP07333 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CSF1RP07333 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSF1RP07333 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSF1RP07333 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSF1RP07333 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC17.61■□□□□ 0.41
CSF1RP07333 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSF1RP07333 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC17.61■□□□□ 0.41
CSF1RP07333 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSF1RP07333 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CSF1RP07333 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC17.61■□□□□ 0.41
CSF1RP07333 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC17.61■□□□□ 0.41
CSF1RP07333 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.61■□□□□ 0.41
CSF1RP07333 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CSF1RP07333 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSF1RP07333 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSF1RP07333 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CSF1RP07333 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSF1RP07333 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSF1RP07333 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.6■□□□□ 0.41
CSF1RP07333 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSF1RP07333 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
CSF1RP07333 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSF1RP07333 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CSF1RP07333 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC17.6■□□□□ 0.41
CSF1RP07333 USP17L6P-201ENST00000382470 1197 ntBASIC17.6■□□□□ 0.41
CSF1RP07333 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CSF1RP07333 HMGA1P1-201ENST00000415560 1062 ntBASIC17.6■□□□□ 0.41
CSF1RP07333 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC17.6■□□□□ 0.41
CSF1RP07333 AC079112.1-201ENST00000454972 939 ntBASIC17.6■□□□□ 0.41
CSF1RP07333 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CSF1RP07333 OR5BD1P-201ENST00000532527 817 ntBASIC17.6■□□□□ 0.41
CSF1RP07333 AC068867.1-201ENST00000559855 150 ntBASIC17.6■□□□□ 0.41
CSF1RP07333 NUDT4P2-201ENST00000578341 546 ntBASIC17.6■□□□□ 0.41
CSF1RP07333 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC17.6■□□□□ 0.41
CSF1RP07333 AC073911.3-201ENST00000624401 631 ntBASIC17.6■□□□□ 0.41
CSF1RP07333 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CSF1RP07333 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CSF1RP07333 KRT8P18-201ENST00000413425 1445 ntBASIC17.6■□□□□ 0.41
CSF1RP07333 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CSF1RP07333 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSF1RP07333 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSF1RP07333 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.6■□□□□ 0.41
CSF1RP07333 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSF1RP07333 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSF1RP07333 SARS-202ENST00000369923 1882 ntTSL 5 BASIC17.6■□□□□ 0.41
CSF1RP07333 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC17.6■□□□□ 0.41
CSF1RP07333 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSF1RP07333 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSF1RP07333 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
CSF1RP07333 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.6■□□□□ 0.41
CSF1RP07333 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CSF1RP07333 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CSF1RP07333 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CSF1RP07333 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CSF1RP07333 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CSF1RP07333 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CSF1RP07333 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSF1RP07333 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSF1RP07333 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSF1RP07333 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC17.59■□□□□ 0.41
CSF1RP07333 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
CSF1RP07333 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSF1RP07333 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms