Protein–RNA interactions for Protein: A6PVL3

KNCN, Kinocilin, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNCNA6PVL3 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
KNCNA6PVL3 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
KNCNA6PVL3 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
KNCNA6PVL3 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
KNCNA6PVL3 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
KNCNA6PVL3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
KNCNA6PVL3 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC10.97□□□□□ -0.65
KNCNA6PVL3 AC006504.5-208ENST00000588784 2401 ntBASIC10.97□□□□□ -0.65
KNCNA6PVL3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
KNCNA6PVL3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
KNCNA6PVL3 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
KNCNA6PVL3 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
KNCNA6PVL3 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
KNCNA6PVL3 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
KNCNA6PVL3 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC10.97□□□□□ -0.65
KNCNA6PVL3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
KNCNA6PVL3 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
KNCNA6PVL3 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
KNCNA6PVL3 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
KNCNA6PVL3 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
KNCNA6PVL3 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
KNCNA6PVL3 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC10.97□□□□□ -0.65
KNCNA6PVL3 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
KNCNA6PVL3 AL136309.1-201ENST00000403917 691 ntBASIC10.97□□□□□ -0.65
KNCNA6PVL3 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC10.97□□□□□ -0.65
KNCNA6PVL3 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC10.97□□□□□ -0.65
KNCNA6PVL3 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC10.97□□□□□ -0.65
KNCNA6PVL3 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC10.97□□□□□ -0.65
KNCNA6PVL3 YBX1P6-201ENST00000442962 1002 ntBASIC10.97□□□□□ -0.65
KNCNA6PVL3 PUDPP3-201ENST00000445368 636 ntBASIC10.97□□□□□ -0.65
KNCNA6PVL3 HIST2H2BB-201ENST00000449108 381 ntBASIC10.97□□□□□ -0.65
KNCNA6PVL3 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
KNCNA6PVL3 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC10.97□□□□□ -0.65
KNCNA6PVL3 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC10.97□□□□□ -0.65
KNCNA6PVL3 AP005482.1-201ENST00000563722 1273 ntBASIC10.97□□□□□ -0.65
KNCNA6PVL3 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC10.97□□□□□ -0.65
KNCNA6PVL3 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC10.97□□□□□ -0.65
KNCNA6PVL3 AL358472.3-201ENST00000608147 415 ntBASIC10.97□□□□□ -0.65
KNCNA6PVL3 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC10.97□□□□□ -0.65
KNCNA6PVL3 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
KNCNA6PVL3 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
KNCNA6PVL3 AC008687.7-202ENST00000637404 953 ntBASIC10.97□□□□□ -0.65
KNCNA6PVL3 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
KNCNA6PVL3 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
KNCNA6PVL3 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
KNCNA6PVL3 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
KNCNA6PVL3 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
KNCNA6PVL3 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
KNCNA6PVL3 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
KNCNA6PVL3 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
KNCNA6PVL3 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
KNCNA6PVL3 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
KNCNA6PVL3 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
KNCNA6PVL3 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC10.97□□□□□ -0.65
KNCNA6PVL3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC10.97□□□□□ -0.65
KNCNA6PVL3 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
KNCNA6PVL3 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
KNCNA6PVL3 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC10.97□□□□□ -0.65
KNCNA6PVL3 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
KNCNA6PVL3 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
KNCNA6PVL3 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
KNCNA6PVL3 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC10.97□□□□□ -0.65
KNCNA6PVL3 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
KNCNA6PVL3 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
KNCNA6PVL3 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC10.96□□□□□ -0.65
KNCNA6PVL3 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
KNCNA6PVL3 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
KNCNA6PVL3 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
KNCNA6PVL3 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
KNCNA6PVL3 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
KNCNA6PVL3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
KNCNA6PVL3 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
KNCNA6PVL3 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
KNCNA6PVL3 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
KNCNA6PVL3 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
KNCNA6PVL3 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
KNCNA6PVL3 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
KNCNA6PVL3 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
KNCNA6PVL3 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
KNCNA6PVL3 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
KNCNA6PVL3 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
KNCNA6PVL3 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC10.96□□□□□ -0.65
KNCNA6PVL3 MVK-214ENST00000629016 1591 ntTSL 5 BASIC10.96□□□□□ -0.65
KNCNA6PVL3 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
KNCNA6PVL3 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
KNCNA6PVL3 F10-203ENST00000409306 1450 ntTSL 3 BASIC10.96□□□□□ -0.65
KNCNA6PVL3 AC015802.1-201ENST00000588104 1449 ntBASIC10.96□□□□□ -0.65
KNCNA6PVL3 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
KNCNA6PVL3 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
KNCNA6PVL3 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
KNCNA6PVL3 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
KNCNA6PVL3 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
KNCNA6PVL3 TPO-206ENST00000382269 1155 ntTSL 5 BASIC10.96□□□□□ -0.65
KNCNA6PVL3 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
KNCNA6PVL3 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC10.96□□□□□ -0.65
KNCNA6PVL3 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
KNCNA6PVL3 AL355994.2-201ENST00000447882 704 ntBASIC10.96□□□□□ -0.65
KNCNA6PVL3 BNIP3P42-201ENST00000454982 569 ntBASIC10.96□□□□□ -0.65
KNCNA6PVL3 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC10.96□□□□□ -0.65
KNCNA6PVL3 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms