Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 SHC1P1-201ENST00000425230 1745 ntBASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PARPBPQ9NWS1 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 AC009093.2-202ENST00000620513 2079 ntBASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 BRWD1P1-201ENST00000401091 371 ntBASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 AC010141.1-201ENST00000411585 623 ntBASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 MTX1P1-201ENST00000440904 838 ntBASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 HIST2H2BB-201ENST00000449108 381 ntBASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PARPBPQ9NWS1 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 AC005840.4-201ENST00000541242 2494 ntBASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.11□□□□□ -0.31
PARPBPQ9NWS1 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms