Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 AL512361.1-201ENST00000554200 418 ntBASIC12.67□□□□□ -0.38
BEST4Q8NFU0 AP001059.3-201ENST00000619053 235 ntBASIC12.67□□□□□ -0.38
BEST4Q8NFU0 AC004461.2-201ENST00000629517 803 ntBASIC12.67□□□□□ -0.38
BEST4Q8NFU0 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 AL109936.8-201ENST00000641772 604 ntBASIC12.67□□□□□ -0.38
BEST4Q8NFU0 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 AC090643.2-201ENST00000623442 2029 ntBASIC12.67□□□□□ -0.38
BEST4Q8NFU0 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.67□□□□□ -0.38
BEST4Q8NFU0 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 TNRC18P1-201ENST00000502875 3650 ntBASIC12.66□□□□□ -0.38
BEST4Q8NFU0 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 AC023141.5-201ENST00000458585 616 ntBASIC12.66□□□□□ -0.38
BEST4Q8NFU0 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 SDHAP3-202ENST00000515467 728 ntBASIC12.66□□□□□ -0.38
BEST4Q8NFU0 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 AC051619.7-201ENST00000568314 623 ntBASIC12.66□□□□□ -0.38
BEST4Q8NFU0 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 MIR4469-201ENST00000583919 79 ntBASIC12.66□□□□□ -0.38
BEST4Q8NFU0 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.66□□□□□ -0.38
BEST4Q8NFU0 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.65□□□□□ -0.38
BEST4Q8NFU0 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BEST4Q8NFU0 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.65□□□□□ -0.38
BEST4Q8NFU0 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
BEST4Q8NFU0 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.65□□□□□ -0.38
BEST4Q8NFU0 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BEST4Q8NFU0 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms