Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SLC38A9Q8NBW4 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC38A9Q8NBW4 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLC38A9Q8NBW4 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC38A9Q8NBW4 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SLC38A9Q8NBW4 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC38A9Q8NBW4 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC38A9Q8NBW4 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 AGGF1P1-201ENST00000509500 2073 ntBASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 MIR557-201ENST00000385239 98 ntBASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 AC092580.1-201ENST00000433998 658 ntBASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 DUX4L50-201ENST00000455245 715 ntBASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 SIGLEC18P-201ENST00000602271 909 ntBASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 AC138894.2-201ENST00000602838 371 ntBASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 AC103810.10-201ENST00000606504 343 ntBASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SLC38A9Q8NBW4 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC38A9Q8NBW4 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC38A9Q8NBW4 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC38A9Q8NBW4 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC38A9Q8NBW4 KRT18P9-201ENST00000604826 1300 ntBASIC13.66□□□□□ -0.22
SLC38A9Q8NBW4 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC38A9Q8NBW4 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC38A9Q8NBW4 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.66□□□□□ -0.22
SLC38A9Q8NBW4 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.66□□□□□ -0.22
SLC38A9Q8NBW4 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC38A9Q8NBW4 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC38A9Q8NBW4 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC38A9Q8NBW4 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC38A9Q8NBW4 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.66□□□□□ -0.22
SLC38A9Q8NBW4 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SLC38A9Q8NBW4 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SLC38A9Q8NBW4 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC13.66□□□□□ -0.22
SLC38A9Q8NBW4 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC38A9Q8NBW4 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SLC38A9Q8NBW4 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SLC38A9Q8NBW4 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC13.66□□□□□ -0.22
SLC38A9Q8NBW4 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms