Protein–RNA interactions for Protein: Q6RI45

BRWD3, Bromodomain and WD repeat-containing protein 3, humanhuman

Predictions only

Length 1,802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD3Q6RI45 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
BRWD3Q6RI45 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
BRWD3Q6RI45 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
BRWD3Q6RI45 MKL1-204ENST00000402630 747 ntTSL 2 BASIC17.98■□□□□ 0.47
BRWD3Q6RI45 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC17.98■□□□□ 0.47
BRWD3Q6RI45 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC17.98■□□□□ 0.47
BRWD3Q6RI45 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC17.98■□□□□ 0.47
BRWD3Q6RI45 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC17.98■□□□□ 0.47
BRWD3Q6RI45 MIR4309-201ENST00000582498 83 ntBASIC17.98■□□□□ 0.47
BRWD3Q6RI45 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
BRWD3Q6RI45 LINC01002-223ENST00000633179 407 ntTSL 5 BASIC17.98■□□□□ 0.47
BRWD3Q6RI45 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
BRWD3Q6RI45 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
BRWD3Q6RI45 LTB4R2-202ENST00000528054 3092 ntBASIC17.98■□□□□ 0.47
BRWD3Q6RI45 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC17.98■□□□□ 0.47
BRWD3Q6RI45 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC17.98■□□□□ 0.47
BRWD3Q6RI45 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.98■□□□□ 0.47
BRWD3Q6RI45 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
BRWD3Q6RI45 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
BRWD3Q6RI45 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
BRWD3Q6RI45 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
BRWD3Q6RI45 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
BRWD3Q6RI45 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC17.98■□□□□ 0.47
BRWD3Q6RI45 OR52N1-201ENST00000317078 963 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
BRWD3Q6RI45 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
BRWD3Q6RI45 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
BRWD3Q6RI45 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC17.98■□□□□ 0.47
BRWD3Q6RI45 TMEM256P1-201ENST00000430550 340 ntBASIC17.98■□□□□ 0.47
BRWD3Q6RI45 RPSAP16-201ENST00000447583 821 ntBASIC17.98■□□□□ 0.47
BRWD3Q6RI45 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC17.98■□□□□ 0.47
BRWD3Q6RI45 AC112694.1-202ENST00000540985 943 ntBASIC17.98■□□□□ 0.47
BRWD3Q6RI45 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC17.98■□□□□ 0.47
BRWD3Q6RI45 TIMM23-201ENST00000580018 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BRWD3Q6RI45 AL356740.1-201ENST00000602192 1297 ntBASIC17.98■□□□□ 0.47
BRWD3Q6RI45 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC17.98■□□□□ 0.47
BRWD3Q6RI45 AL109954.3-201ENST00000615088 558 ntBASIC17.98■□□□□ 0.47
BRWD3Q6RI45 AL158032.2-201ENST00000616818 195 ntBASIC17.98■□□□□ 0.47
BRWD3Q6RI45 GARS-210ENST00000627489 324 ntTSL 4 BASIC17.98■□□□□ 0.47
BRWD3Q6RI45 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
BRWD3Q6RI45 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
BRWD3Q6RI45 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
BRWD3Q6RI45 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BRWD3Q6RI45 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.97■□□□□ 0.47
BRWD3Q6RI45 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BRWD3Q6RI45 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BRWD3Q6RI45 AC215219.1-201ENST00000400706 1817 ntBASIC17.97■□□□□ 0.47
BRWD3Q6RI45 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
BRWD3Q6RI45 DDC-204ENST00000426377 1700 ntTSL 3 BASIC17.97■□□□□ 0.47
BRWD3Q6RI45 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
BRWD3Q6RI45 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BRWD3Q6RI45 TPM3P7-201ENST00000338274 732 ntBASIC17.97■□□□□ 0.47
BRWD3Q6RI45 POLR3DP1-201ENST00000398689 1176 ntBASIC17.97■□□□□ 0.47
BRWD3Q6RI45 ACTG1P23-201ENST00000437653 1074 ntBASIC17.97■□□□□ 0.47
BRWD3Q6RI45 RPL3P9-201ENST00000463217 1183 ntBASIC17.97■□□□□ 0.47
BRWD3Q6RI45 AC246817.2-204ENST00000517984 562 ntTSL 4 BASIC17.97■□□□□ 0.47
BRWD3Q6RI45 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC17.97■□□□□ 0.47
BRWD3Q6RI45 AC032044.1-201ENST00000570924 570 ntTSL 4 BASIC17.97■□□□□ 0.47
BRWD3Q6RI45 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
BRWD3Q6RI45 RN7SL460P-201ENST00000582806 258 ntBASIC17.97■□□□□ 0.47
BRWD3Q6RI45 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
BRWD3Q6RI45 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BRWD3Q6RI45 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC17.97■□□□□ 0.47
BRWD3Q6RI45 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
BRWD3Q6RI45 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BRWD3Q6RI45 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
BRWD3Q6RI45 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
BRWD3Q6RI45 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BRWD3Q6RI45 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BRWD3Q6RI45 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC17.96■□□□□ 0.47
BRWD3Q6RI45 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
BRWD3Q6RI45 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BRWD3Q6RI45 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BRWD3Q6RI45 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.96■□□□□ 0.47
BRWD3Q6RI45 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC17.96■□□□□ 0.47
BRWD3Q6RI45 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BRWD3Q6RI45 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC17.96■□□□□ 0.47
BRWD3Q6RI45 AC053503.4-201ENST00000431827 224 ntTSL 5 BASIC17.96■□□□□ 0.47
BRWD3Q6RI45 EIF2B5-202ENST00000432569 984 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BRWD3Q6RI45 MYADML-201ENST00000474610 2147 ntBASIC17.96■□□□□ 0.47
BRWD3Q6RI45 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC17.96■□□□□ 0.47
BRWD3Q6RI45 C12orf45-205ENST00000622317 1078 ntTSL 5 BASIC17.96■□□□□ 0.47
BRWD3Q6RI45 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
BRWD3Q6RI45 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.96■□□□□ 0.47
BRWD3Q6RI45 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC17.96■□□□□ 0.47
BRWD3Q6RI45 RN7SL832P-201ENST00000607781 1756 ntBASIC17.96■□□□□ 0.47
BRWD3Q6RI45 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BRWD3Q6RI45 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC17.96■□□□□ 0.47
BRWD3Q6RI45 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC17.96■□□□□ 0.47
BRWD3Q6RI45 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BRWD3Q6RI45 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
BRWD3Q6RI45 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BRWD3Q6RI45 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC17.96■□□□□ 0.47
BRWD3Q6RI45 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BRWD3Q6RI45 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.96■□□□□ 0.47
BRWD3Q6RI45 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
BRWD3Q6RI45 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BRWD3Q6RI45 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BRWD3Q6RI45 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.96■□□□□ 0.46
BRWD3Q6RI45 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
BRWD3Q6RI45 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms