RNA–Protein interactions for RNA: ENST00000239666.8

PDZD11-201, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD11, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-201ENST00000239666 AEBP2Q6ZN18 517 aaPredicted RBP33.3■■■□□ 2.92
PDZD11-201ENST00000239666 CHIC1Q5VXU3 224 aa32.76■■■□□ 2.83
PDZD11-201ENST00000239666 NISCHQ9Y2I1 1504 aa31.23■■■□□ 2.59
PDZD11-201ENST00000239666 PHF23Q9BUL5 403 aaPredicted RBP28.79■■■□□ 2.2
PDZD11-201ENST00000239666 SENP3Q9H4L4 574 aaPredicted RBP28.32■■■□□ 2.12
PDZD11-201ENST00000239666 CCDC180Q9P1Z9 1646 aa28■■■□□ 2.07
PDZD11-201ENST00000239666 ABCC9O60706 1549 aa27.61■■■□□ 2.01
PDZD11-201ENST00000239666 PLPPR3Q6T4P5 718 aa26.74■■□□□ 1.87
PDZD11-201ENST00000239666 RB1CC1Q8TDY2 1594 aa26.55■■□□□ 1.84
PDZD11-201ENST00000239666 NACADO15069 1562 aa26.45■■□□□ 1.82
PDZD11-201ENST00000239666 DCAF8L2P0C7V8 631 aa26.28■■□□□ 1.8
PDZD11-201ENST00000239666 MYO15BQ96JP2 1530 aa26.21■■□□□ 1.79
PDZD11-201ENST00000239666 FOXD1Q16676 465 aa26.2■■□□□ 1.78
PDZD11-201ENST00000239666 DCAF1Q9Y4B6 1507 aa25.92■■□□□ 1.74
PDZD11-201ENST00000239666 ZCCHC6Q5VYS8 1495 aaKnown RBP25.9■■□□□ 1.74
PDZD11-201ENST00000239666 UNC13AQ9UPW8 1703 aa25.78■■□□□ 1.72
PDZD11-201ENST00000239666 PABPN1Q86U42 306 aaKnown RBP eCLIP25.72■■□□□ 1.71
PDZD11-201ENST00000239666 DNAJC5BQ9UF47 199 aa25.59■■□□□ 1.69
PDZD11-201ENST00000239666 BICRAQ9NZM4 1560 aa25.58■■□□□ 1.69
PDZD11-201ENST00000239666 SHROOM4Q9ULL8 1493 aa25.55■■□□□ 1.68
PDZD11-201ENST00000239666 ADRA2BP18089 450 aa25.39■■□□□ 1.66
PDZD11-201ENST00000239666 PPP6R1Q9UPN7 881 aa25.36■■□□□ 1.65
PDZD11-201ENST00000239666 SCRIBQ14160 1630 aa25.35■■□□□ 1.65
PDZD11-201ENST00000239666 EIF4G1Q04637 1599 aaKnown RBP25.01■■□□□ 1.59
PDZD11-201ENST00000239666 CC2D2AQ9P2K1 1620 aa24.99■■□□□ 1.59
PDZD11-201ENST00000239666 CECR2Q9BXF3 1484 aa24.92■■□□□ 1.58
PDZD11-201ENST00000239666 PIAS4Q8N2W9 510 aaPredicted RBP24.82■■□□□ 1.56
PDZD11-201ENST00000239666 NCAPD3P42695 1498 aa24.37■■□□□ 1.49
PDZD11-201ENST00000239666 SMARCA2P51531 1590 aa24.32■■□□□ 1.48
PDZD11-201ENST00000239666 BAZ1AQ9NRL2 1556 aaPredicted RBP24.29■■□□□ 1.48
PDZD11-201ENST00000239666 SMARCA4P51532 1647 aa24.28■■□□□ 1.48
PDZD11-201ENST00000239666 ATAD2BQ9ULI0 1458 aa24.26■■□□□ 1.47
PDZD11-201ENST00000239666 HMGXB3Q12766 1538 aa24.2■■□□□ 1.47
PDZD11-201ENST00000239666 MSH5O43196 834 aa24.15■■□□□ 1.46
PDZD11-201ENST00000239666 PEG3Q9GZU2 1588 aa24.11■■□□□ 1.45
PDZD11-201ENST00000239666 BAZ1BQ9UIG0 1483 aaKnown RBP24.08■■□□□ 1.45
PDZD11-201ENST00000239666 MROH2BQ7Z745 1585 aa23.96■■□□□ 1.43
PDZD11-201ENST00000239666 ERCC6Q03468 1493 aa23.95■■□□□ 1.42
PDZD11-201ENST00000239666 CUX2O14529 1486 aa23.87■■□□□ 1.41
PDZD11-201ENST00000239666 LAMC3Q9Y6N6 1575 aa23.82■■□□□ 1.4
PDZD11-201ENST00000239666 PDS5BQ9NTI5 1447 aa23.72■■□□□ 1.39
PDZD11-201ENST00000239666 NESP48681 1621 aa23.71■■□□□ 1.39
PDZD11-201ENST00000239666 WIZO95785 1651 aa23.69■■□□□ 1.38
PDZD11-201ENST00000239666 CADPSQ9ULU8 1353 aa23.65■■□□□ 1.38
PDZD11-201ENST00000239666 RSF1Q96T23 1441 aaPredicted RBP23.61■■□□□ 1.37
PDZD11-201ENST00000239666 PPP4R3CPQ6ZMV5 832 aa23.57■■□□□ 1.36
PDZD11-201ENST00000239666 DNAJC5Q9H3Z4 198 aa23.55■■□□□ 1.36
PDZD11-201ENST00000239666 TOP2AP11388 1531 aaKnown RBP23.49■■□□□ 1.35
PDZD11-201ENST00000239666 THOC2Q8NI27 1593 aaKnown RBP23.49■■□□□ 1.35
PDZD11-201ENST00000239666 KIF21AQ7Z4S6 1674 aa23.48■■□□□ 1.35
PDZD11-201ENST00000239666 CFTRP13569 1480 aa23.39■■□□□ 1.34
PDZD11-201ENST00000239666 MRC2Q9UBG0 1479 aa23.39■■□□□ 1.34
PDZD11-201ENST00000239666 CEP164Q9UPV0 1460 aa23.36■■□□□ 1.33
PDZD11-201ENST00000239666 FANCD2Q9BXW9 1451 aa23.32■■□□□ 1.32
PDZD11-201ENST00000239666 SCAF1Q9H7N4 1312 aaKnown RBP23.32■■□□□ 1.32
PDZD11-201ENST00000239666 WDR62O43379 1518 aa23.3■■□□□ 1.32
PDZD11-201ENST00000239666 KCNA4P22459 653 aa23.22■■□□□ 1.31
PDZD11-201ENST00000239666 PRDM2Q13029 1718 aa23.2■■□□□ 1.3
PDZD11-201ENST00000239666 CCDC88BA6NC98 1476 aa23.19■■□□□ 1.3
PDZD11-201ENST00000239666 NCBP3Q53F19 620 aaKnown RBP23.08■■□□□ 1.29
PDZD11-201ENST00000239666 ABCC8Q09428 1581 aa23.07■■□□□ 1.28
PDZD11-201ENST00000239666 URB2Q14146 1524 aaKnown RBP23.03■■□□□ 1.28
PDZD11-201ENST00000239666 MAPK8IP2Q13387 824 aaPredicted RBP22.96■■□□□ 1.27
PDZD11-201ENST00000239666 IFT140Q96RY7 1462 aa22.92■■□□□ 1.26
PDZD11-201ENST00000239666 TOPBP1Q92547 1522 aa22.88■■□□□ 1.25
PDZD11-201ENST00000239666 CNKSR2Q8WXI2 1034 aa22.88■■□□□ 1.25
PDZD11-201ENST00000239666 DNMBPQ6XZF7 1577 aa22.86■■□□□ 1.25
PDZD11-201ENST00000239666 OSCARQ8IYS5 282 aa22.86■■□□□ 1.25
PDZD11-201ENST00000239666 SUPT5HO00267 1087 aaKnown RBP22.74■■□□□ 1.23
PDZD11-201ENST00000239666 ZNF608Q9ULD9 1512 aaPredicted RBP22.68■■□□□ 1.22
PDZD11-201ENST00000239666 POLA1P09884 1462 aaPredicted RBP22.66■■□□□ 1.22
PDZD11-201ENST00000239666 NPM3O75607 178 aaKnown RBP22.65■■□□□ 1.22
PDZD11-201ENST00000239666 TARBP1Q13395 1621 aaKnown RBP22.64■■□□□ 1.22
PDZD11-201ENST00000239666 WDR97A6NE52 1622 aa22.63■■□□□ 1.21
PDZD11-201ENST00000239666 SOGA1O94964 1423 aa22.63■■□□□ 1.21
PDZD11-201ENST00000239666 EIF4G3O43432 1585 aaKnown RBP22.63■■□□□ 1.21
PDZD11-201ENST00000239666 DMRT2Q9Y5R5 561 aa22.6■■□□□ 1.21
PDZD11-201ENST00000239666 AQRO60306 1485 aaKnown RBP eCLIP22.56■■□□□ 1.2
PDZD11-201ENST00000239666 FGD5Q6ZNL6 1462 aa22.54■■□□□ 1.2
PDZD11-201ENST00000239666 TRIM41Q8WV44 630 aa22.53■■□□□ 1.2
PDZD11-201ENST00000239666 CUX1P39880 1505 aa22.52■■□□□ 1.19
PDZD11-201ENST00000239666 RAD54L2Q9Y4B4 1467 aa22.5■■□□□ 1.19
PDZD11-201ENST00000239666 TDRD9Q8NDG6 1382 aaKnown RBP22.47■■□□□ 1.19
PDZD11-201ENST00000239666 FBLN2P98095 1184 aa22.46■■□□□ 1.19
PDZD11-201ENST00000239666 GRIN2BQ13224 1484 aa22.42■■□□□ 1.18
PDZD11-201ENST00000239666 MAGI1Q96QZ7 1491 aaPredicted RBP22.42■■□□□ 1.18
PDZD11-201ENST00000239666 CHD1O14646 1710 aa22.4■■□□□ 1.18
PDZD11-201ENST00000239666 CHMP7Q8WUX9 453 aaPredicted RBP22.4■■□□□ 1.18
PDZD11-201ENST00000239666 WRNQ14191 1432 aaPredicted RBP eCLIP22.38■■□□□ 1.17
PDZD11-201ENST00000239666 RNF216Q9NWF9 866 aaPredicted RBP22.37■■□□□ 1.17
PDZD11-201ENST00000239666 ABCA10Q8WWZ4 1543 aa22.36■■□□□ 1.17
PDZD11-201ENST00000239666 RIMBP3CA6NJZ7 1639 aa22.36■■□□□ 1.17
PDZD11-201ENST00000239666 RIMBP3BA6NNM3 1639 aa22.36■■□□□ 1.17
PDZD11-201ENST00000239666 RIMBP3Q9UFD9 1639 aa22.36■■□□□ 1.17
PDZD11-201ENST00000239666 GAPVD1Q14C86 1478 aa22.35■■□□□ 1.17
PDZD11-201ENST00000239666 SNAPC4Q5SXM2 1469 aa22.34■■□□□ 1.17
PDZD11-201ENST00000239666 ARHGEF11O15085 1522 aa22.34■■□□□ 1.17
PDZD11-201ENST00000239666 SYNJ2O15056 1496 aa22.31■■□□□ 1.16
PDZD11-201ENST00000239666 TOP2BQ02880 1626 aa22.31■■□□□ 1.16
PDZD11-201ENST00000239666 SYNJ1O43426 1573 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms