Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NUP98P52948 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NUP98P52948 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.62■□□□□ 0.41
NUP98P52948 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NUP98P52948 AC015802.1-201ENST00000588104 1449 ntBASIC17.62■□□□□ 0.41
NUP98P52948 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC17.61■□□□□ 0.41
NUP98P52948 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NUP98P52948 PES1P2-201ENST00000449745 1735 ntBASIC17.61■□□□□ 0.41
NUP98P52948 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
NUP98P52948 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
NUP98P52948 SSR4-202ENST00000370085 526 ntTSL 2 BASIC17.61■□□□□ 0.41
NUP98P52948 ABCD1P4-201ENST00000399687 604 ntBASIC17.61■□□□□ 0.41
NUP98P52948 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC17.61■□□□□ 0.41
NUP98P52948 BPIFB5P-201ENST00000457066 1099 ntBASIC17.61■□□□□ 0.41
NUP98P52948 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC17.61■□□□□ 0.41
NUP98P52948 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC17.61■□□□□ 0.41
NUP98P52948 GOLGA2P7-209ENST00000560408 745 ntBASIC17.61■□□□□ 0.41
NUP98P52948 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC17.61■□□□□ 0.41
NUP98P52948 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NUP98P52948 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.61■□□□□ 0.41
NUP98P52948 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
NUP98P52948 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NUP98P52948 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NUP98P52948 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NUP98P52948 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NUP98P52948 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NUP98P52948 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NUP98P52948 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NUP98P52948 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC17.61■□□□□ 0.41
NUP98P52948 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC17.61■□□□□ 0.41
NUP98P52948 AC008026.2-201ENST00000495438 348 ntBASIC17.61■□□□□ 0.41
NUP98P52948 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC17.61■□□□□ 0.41
NUP98P52948 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NUP98P52948 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NUP98P52948 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
NUP98P52948 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NUP98P52948 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
NUP98P52948 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
NUP98P52948 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NUP98P52948 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NUP98P52948 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NUP98P52948 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NUP98P52948 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NUP98P52948 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NUP98P52948 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NUP98P52948 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC17.6■□□□□ 0.41
NUP98P52948 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
NUP98P52948 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
NUP98P52948 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NUP98P52948 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC17.6■□□□□ 0.41
NUP98P52948 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
NUP98P52948 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC17.6■□□□□ 0.41
NUP98P52948 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NUP98P52948 AC005722.1-201ENST00000431878 964 ntBASIC17.6■□□□□ 0.41
NUP98P52948 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NUP98P52948 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NUP98P52948 CES1P2-201ENST00000566467 1242 ntBASIC17.6■□□□□ 0.41
NUP98P52948 AC010632.2-201ENST00000588369 1224 ntBASIC17.6■□□□□ 0.41
NUP98P52948 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NUP98P52948 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
NUP98P52948 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NUP98P52948 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
NUP98P52948 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
NUP98P52948 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NUP98P52948 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NUP98P52948 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
NUP98P52948 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
NUP98P52948 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.6■□□□□ 0.41
NUP98P52948 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.59■□□□□ 0.41
NUP98P52948 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
NUP98P52948 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NUP98P52948 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NUP98P52948 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NUP98P52948 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NUP98P52948 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC17.59■□□□□ 0.41
NUP98P52948 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC17.59■□□□□ 0.41
NUP98P52948 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NUP98P52948 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
NUP98P52948 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
NUP98P52948 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC17.59■□□□□ 0.41
NUP98P52948 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC17.59■□□□□ 0.41
NUP98P52948 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC17.59■□□□□ 0.41
NUP98P52948 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC17.59■□□□□ 0.41
NUP98P52948 FAM86B3P-203ENST00000523992 854 ntBASIC17.59■□□□□ 0.41
NUP98P52948 ETV2-207ENST00000619399 994 ntTSL 5 BASIC17.59■□□□□ 0.41
NUP98P52948 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
NUP98P52948 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.59■□□□□ 0.41
NUP98P52948 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC17.59■□□□□ 0.41
NUP98P52948 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC17.59■□□□□ 0.41
NUP98P52948 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NUP98P52948 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NUP98P52948 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
NUP98P52948 CICP16-201ENST00000502609 2813 ntBASIC17.59■□□□□ 0.41
NUP98P52948 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC17.59■□□□□ 0.41
NUP98P52948 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
NUP98P52948 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NUP98P52948 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NUP98P52948 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
NUP98P52948 AL590824.1-201ENST00000403828 1349 ntBASIC17.59■□□□□ 0.41
NUP98P52948 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms