Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.71□□□□□ -0.05
GPC4O75487 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GPC4O75487 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GPC4O75487 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
GPC4O75487 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GPC4O75487 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GPC4O75487 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
GPC4O75487 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
GPC4O75487 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
GPC4O75487 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
GPC4O75487 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
GPC4O75487 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
GPC4O75487 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.71□□□□□ -0.06
GPC4O75487 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.06
GPC4O75487 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
GPC4O75487 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
GPC4O75487 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
GPC4O75487 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.71□□□□□ -0.06
GPC4O75487 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.71□□□□□ -0.06
GPC4O75487 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.71□□□□□ -0.06
GPC4O75487 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
GPC4O75487 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
GPC4O75487 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.7□□□□□ -0.06
GPC4O75487 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GPC4O75487 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GPC4O75487 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
GPC4O75487 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GPC4O75487 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GPC4O75487 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
GPC4O75487 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GPC4O75487 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.7□□□□□ -0.06
GPC4O75487 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.7□□□□□ -0.06
GPC4O75487 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.7□□□□□ -0.06
GPC4O75487 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.7□□□□□ -0.06
GPC4O75487 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
GPC4O75487 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GPC4O75487 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GPC4O75487 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
GPC4O75487 RN7SKP230-201ENST00000365642 335 ntBASIC14.7□□□□□ -0.06
GPC4O75487 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GPC4O75487 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
GPC4O75487 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GPC4O75487 AC079776.1-201ENST00000401540 1152 ntBASIC14.7□□□□□ -0.06
GPC4O75487 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.7□□□□□ -0.06
GPC4O75487 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.7□□□□□ -0.06
GPC4O75487 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GPC4O75487 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.7□□□□□ -0.06
GPC4O75487 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GPC4O75487 FAM197Y7-201ENST00000432892 766 ntBASIC14.7□□□□□ -0.06
GPC4O75487 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.7□□□□□ -0.06
GPC4O75487 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
GPC4O75487 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
GPC4O75487 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.7□□□□□ -0.06
GPC4O75487 FTLP10-202ENST00000505798 471 ntBASIC14.7□□□□□ -0.06
GPC4O75487 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.7□□□□□ -0.06
GPC4O75487 KRT17P8-201ENST00000540749 863 ntBASIC14.7□□□□□ -0.06
GPC4O75487 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GPC4O75487 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.7□□□□□ -0.06
GPC4O75487 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.7□□□□□ -0.06
GPC4O75487 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.7□□□□□ -0.06
GPC4O75487 AC138696.2-201ENST00000607376 223 ntBASIC14.7□□□□□ -0.06
GPC4O75487 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.7□□□□□ -0.06
GPC4O75487 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GPC4O75487 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GPC4O75487 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GPC4O75487 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GPC4O75487 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GPC4O75487 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GPC4O75487 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
GPC4O75487 SALL4P5-201ENST00000419001 1760 ntBASIC14.7□□□□□ -0.06
GPC4O75487 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
GPC4O75487 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
GPC4O75487 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GPC4O75487 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GPC4O75487 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GPC4O75487 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.69□□□□□ -0.06
GPC4O75487 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
GPC4O75487 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GPC4O75487 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
GPC4O75487 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
GPC4O75487 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
GPC4O75487 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.69□□□□□ -0.06
GPC4O75487 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GPC4O75487 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
GPC4O75487 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
GPC4O75487 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
GPC4O75487 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.69□□□□□ -0.06
GPC4O75487 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GPC4O75487 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GPC4O75487 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.69□□□□□ -0.06
GPC4O75487 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GPC4O75487 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GPC4O75487 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
GPC4O75487 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
GPC4O75487 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GPC4O75487 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GPC4O75487 AC006001.1-201ENST00000325130 474 ntBASIC14.69□□□□□ -0.06
GPC4O75487 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
GPC4O75487 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
GPC4O75487 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms