Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.84□□□□□ -0.19
SCN2BO60939 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SCN2BO60939 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SCN2BO60939 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SCN2BO60939 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SCN2BO60939 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
SCN2BO60939 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
SCN2BO60939 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.84□□□□□ -0.19
SCN2BO60939 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SCN2BO60939 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SCN2BO60939 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SCN2BO60939 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SCN2BO60939 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.84□□□□□ -0.19
SCN2BO60939 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.84□□□□□ -0.19
SCN2BO60939 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.84□□□□□ -0.19
SCN2BO60939 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SCN2BO60939 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.84□□□□□ -0.19
SCN2BO60939 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.84□□□□□ -0.19
SCN2BO60939 TERF1P3-201ENST00000505638 1227 ntBASIC13.84□□□□□ -0.19
SCN2BO60939 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
SCN2BO60939 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.84□□□□□ -0.19
SCN2BO60939 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
SCN2BO60939 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.84□□□□□ -0.19
SCN2BO60939 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.84□□□□□ -0.19
SCN2BO60939 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SCN2BO60939 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SCN2BO60939 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
SCN2BO60939 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SCN2BO60939 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SCN2BO60939 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.84□□□□□ -0.19
SCN2BO60939 TUBB8P4-201ENST00000511806 1324 ntBASIC13.84□□□□□ -0.19
SCN2BO60939 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
SCN2BO60939 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SCN2BO60939 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SCN2BO60939 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SCN2BO60939 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.84□□□□□ -0.19
SCN2BO60939 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.84□□□□□ -0.19
SCN2BO60939 AC092053.3-201ENST00000641308 4975 ntBASIC13.84□□□□□ -0.19
SCN2BO60939 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SCN2BO60939 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SCN2BO60939 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SCN2BO60939 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SCN2BO60939 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
SCN2BO60939 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.84□□□□□ -0.19
SCN2BO60939 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.83□□□□□ -0.19
SCN2BO60939 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.19
SCN2BO60939 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SCN2BO60939 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SCN2BO60939 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SCN2BO60939 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SCN2BO60939 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SCN2BO60939 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
SCN2BO60939 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCN2BO60939 AL022313.4-201ENST00000562756 2046 ntBASIC13.83□□□□□ -0.2
SCN2BO60939 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
SCN2BO60939 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
SCN2BO60939 AC111170.3-201ENST00000624282 2464 ntBASIC13.83□□□□□ -0.2
SCN2BO60939 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCN2BO60939 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCN2BO60939 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.83□□□□□ -0.2
SCN2BO60939 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCN2BO60939 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCN2BO60939 TPM3P8-201ENST00000330554 643 ntBASIC13.83□□□□□ -0.2
SCN2BO60939 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.83□□□□□ -0.2
SCN2BO60939 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.83□□□□□ -0.2
SCN2BO60939 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.83□□□□□ -0.2
SCN2BO60939 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SCN2BO60939 AC092933.1-201ENST00000393644 945 ntBASIC13.83□□□□□ -0.2
SCN2BO60939 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
SCN2BO60939 AL161932.2-201ENST00000435436 679 ntBASIC13.83□□□□□ -0.2
SCN2BO60939 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCN2BO60939 CRB3P1-201ENST00000449338 276 ntBASIC13.83□□□□□ -0.2
SCN2BO60939 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.83□□□□□ -0.2
SCN2BO60939 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SCN2BO60939 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.83□□□□□ -0.2
SCN2BO60939 AC027237.1-201ENST00000560942 655 ntBASIC13.83□□□□□ -0.2
SCN2BO60939 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.83□□□□□ -0.2
SCN2BO60939 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.83□□□□□ -0.2
SCN2BO60939 ECM1P1-201ENST00000604092 1279 ntBASIC13.83□□□□□ -0.2
SCN2BO60939 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.83□□□□□ -0.2
SCN2BO60939 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
SCN2BO60939 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
SCN2BO60939 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCN2BO60939 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCN2BO60939 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SCN2BO60939 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SCN2BO60939 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SCN2BO60939 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
SCN2BO60939 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
SCN2BO60939 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCN2BO60939 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCN2BO60939 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCN2BO60939 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SCN2BO60939 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.83□□□□□ -0.2
SCN2BO60939 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCN2BO60939 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCN2BO60939 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.83□□□□□ -0.2
SCN2BO60939 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SCN2BO60939 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.82□□□□□ -0.2
SCN2BO60939 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms