Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 AL773545.2-201ENST00000442149 472 ntBASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 SCARNA12-201ENST00000459155 270 ntBASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 KRT18P37-201ENST00000520711 1282 ntBASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 GGNBP1-204ENST00000613113 887 ntBASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCDC168Q8NDH2 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 FAM21EP-201ENST00000417804 985 ntBASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 MIR6893-201ENST00000613458 69 ntBASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 CICP23-201ENST00000605013 2741 ntBASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 AC117503.4-201ENST00000623229 1418 ntBASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 HLA-DMA-202ENST00000395303 1007 ntBASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 MIR4746-201ENST00000579802 71 ntBASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 AL359091.4-201ENST00000610052 409 ntBASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCDC168Q8NDH2 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms