Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 HLA-J-204ENST00000495278 958 ntBASIC15.89■□□□□ 0.13
VPS52Q8N1B4 RCC2P8-201ENST00000502779 1035 ntBASIC15.89■□□□□ 0.13
VPS52Q8N1B4 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 AC090857.1-201ENST00000527400 390 ntBASIC15.89■□□□□ 0.13
VPS52Q8N1B4 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 MIR5572-201ENST00000583188 137 ntBASIC15.89■□□□□ 0.13
VPS52Q8N1B4 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 AC008825.2-201ENST00000603374 718 ntBASIC15.89■□□□□ 0.13
VPS52Q8N1B4 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 NAP1L6-202ENST00000641404 1222 ntBASIC15.89■□□□□ 0.13
VPS52Q8N1B4 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 ISCA2P1-201ENST00000425548 448 ntBASIC15.88■□□□□ 0.13
VPS52Q8N1B4 VDAC1P1-201ENST00000439229 848 ntBASIC15.88■□□□□ 0.13
VPS52Q8N1B4 AL353637.1-201ENST00000451571 732 ntBASIC15.88■□□□□ 0.13
VPS52Q8N1B4 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 AC009779.1-201ENST00000551138 283 ntBASIC15.88■□□□□ 0.13
VPS52Q8N1B4 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 AC103988.2-201ENST00000561804 725 ntBASIC15.88■□□□□ 0.13
VPS52Q8N1B4 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 AL008718.2-201ENST00000609206 1313 ntBASIC15.88■□□□□ 0.13
VPS52Q8N1B4 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 MBLAC2-202ENST00000514906 1936 ntBASIC15.88■□□□□ 0.13
VPS52Q8N1B4 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VPS52Q8N1B4 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms