Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 AL365203.3-201ENST00000609742 2057 ntBASIC16.77■□□□□ 0.28
USP50Q70EL3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP50Q70EL3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP50Q70EL3 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP50Q70EL3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.77■□□□□ 0.28
USP50Q70EL3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP50Q70EL3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
USP50Q70EL3 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP50Q70EL3 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP50Q70EL3 AL391005.1-201ENST00000623953 2435 ntBASIC16.77■□□□□ 0.28
USP50Q70EL3 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
USP50Q70EL3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP50Q70EL3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP50Q70EL3 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP50Q70EL3 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC16.77■□□□□ 0.28
USP50Q70EL3 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
USP50Q70EL3 RPSAP12-201ENST00000435879 888 ntBASIC16.77■□□□□ 0.28
USP50Q70EL3 AL773545.2-201ENST00000442149 472 ntBASIC16.77■□□□□ 0.28
USP50Q70EL3 RHOQP2-201ENST00000449922 579 ntBASIC16.77■□□□□ 0.28
USP50Q70EL3 PEBP1P3-201ENST00000455475 548 ntBASIC16.77■□□□□ 0.28
USP50Q70EL3 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC16.77■□□□□ 0.28
USP50Q70EL3 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC16.77■□□□□ 0.28
USP50Q70EL3 BMF-206ENST00000558774 671 ntTSL 3 BASIC16.77■□□□□ 0.28
USP50Q70EL3 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
USP50Q70EL3 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC16.77■□□□□ 0.28
USP50Q70EL3 RN7SL524P-201ENST00000581152 300 ntBASIC16.77■□□□□ 0.28
USP50Q70EL3 AC026336.4-201ENST00000624565 1050 ntBASIC16.77■□□□□ 0.28
USP50Q70EL3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP50Q70EL3 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
USP50Q70EL3 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
USP50Q70EL3 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
USP50Q70EL3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
USP50Q70EL3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
USP50Q70EL3 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.77■□□□□ 0.27
USP50Q70EL3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
USP50Q70EL3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
USP50Q70EL3 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC16.77■□□□□ 0.27
USP50Q70EL3 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
USP50Q70EL3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
USP50Q70EL3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
USP50Q70EL3 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.77■□□□□ 0.27
USP50Q70EL3 GOLGA8UP-201ENST00000527159 1755 ntBASIC16.77■□□□□ 0.27
USP50Q70EL3 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
USP50Q70EL3 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.76■□□□□ 0.27
USP50Q70EL3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.76■□□□□ 0.27
USP50Q70EL3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
USP50Q70EL3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
USP50Q70EL3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USP50Q70EL3 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
USP50Q70EL3 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
USP50Q70EL3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.76■□□□□ 0.27
USP50Q70EL3 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
USP50Q70EL3 SHMT1P1-201ENST00000419974 1312 ntBASIC16.76■□□□□ 0.27
USP50Q70EL3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
USP50Q70EL3 FAM226B-201ENST00000602508 1490 ntBASIC16.76■□□□□ 0.27
USP50Q70EL3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USP50Q70EL3 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
USP50Q70EL3 HDGF-202ENST00000368206 960 ntTSL 5 BASIC16.76■□□□□ 0.27
USP50Q70EL3 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USP50Q70EL3 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC16.76■□□□□ 0.27
USP50Q70EL3 AC098657.1-201ENST00000416270 1135 ntBASIC16.76■□□□□ 0.27
USP50Q70EL3 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC16.76■□□□□ 0.27
USP50Q70EL3 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USP50Q70EL3 TBC1D3P6-201ENST00000505954 962 ntBASIC16.76■□□□□ 0.27
USP50Q70EL3 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC16.76■□□□□ 0.27
USP50Q70EL3 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC16.76■□□□□ 0.27
USP50Q70EL3 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC16.76■□□□□ 0.27
USP50Q70EL3 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
USP50Q70EL3 AL353622.2-201ENST00000605846 425 ntBASIC16.76■□□□□ 0.27
USP50Q70EL3 AL591424.3-201ENST00000614278 872 ntBASIC16.76■□□□□ 0.27
USP50Q70EL3 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC16.76■□□□□ 0.27
USP50Q70EL3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USP50Q70EL3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USP50Q70EL3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
USP50Q70EL3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
USP50Q70EL3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USP50Q70EL3 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.76■□□□□ 0.27
USP50Q70EL3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USP50Q70EL3 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USP50Q70EL3 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USP50Q70EL3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
USP50Q70EL3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
USP50Q70EL3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
USP50Q70EL3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.76■□□□□ 0.27
USP50Q70EL3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.76■□□□□ 0.27
USP50Q70EL3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USP50Q70EL3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
USP50Q70EL3 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC16.76■□□□□ 0.27
USP50Q70EL3 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
USP50Q70EL3 HLF-202ENST00000430986 1385 ntTSL 2 BASIC16.76■□□□□ 0.27
USP50Q70EL3 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
USP50Q70EL3 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
USP50Q70EL3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
USP50Q70EL3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
USP50Q70EL3 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
USP50Q70EL3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.75■□□□□ 0.27
USP50Q70EL3 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
USP50Q70EL3 AC064801.2-201ENST00000625052 1303 ntBASIC16.75■□□□□ 0.27
USP50Q70EL3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.75■□□□□ 0.27
USP50Q70EL3 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms