Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDH12P55289 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDH12P55289 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.67□□□□□ -0.22
CDH12P55289 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.67□□□□□ -0.22
CDH12P55289 CLUHP6-201ENST00000580789 941 ntBASIC13.67□□□□□ -0.22
CDH12P55289 CTBP2P3-201ENST00000585629 1255 ntBASIC13.67□□□□□ -0.22
CDH12P55289 AC008494.3-201ENST00000606615 944 ntBASIC13.67□□□□□ -0.22
CDH12P55289 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.67□□□□□ -0.22
CDH12P55289 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDH12P55289 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDH12P55289 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDH12P55289 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDH12P55289 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDH12P55289 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CDH12P55289 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDH12P55289 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
CDH12P55289 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDH12P55289 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDH12P55289 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
CDH12P55289 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CDH12P55289 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CDH12P55289 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDH12P55289 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CDH12P55289 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH12P55289 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
CDH12P55289 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.66□□□□□ -0.22
CDH12P55289 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CDH12P55289 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.66□□□□□ -0.22
CDH12P55289 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.66□□□□□ -0.22
CDH12P55289 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH12P55289 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.66□□□□□ -0.22
CDH12P55289 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH12P55289 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH12P55289 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH12P55289 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CDH12P55289 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH12P55289 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.66□□□□□ -0.22
CDH12P55289 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH12P55289 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDH12P55289 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH12P55289 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH12P55289 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH12P55289 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.66□□□□□ -0.22
CDH12P55289 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDH12P55289 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.66□□□□□ -0.22
CDH12P55289 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH12P55289 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CDH12P55289 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.66□□□□□ -0.22
CDH12P55289 AP001063.1-201ENST00000568332 529 ntBASIC13.66□□□□□ -0.22
CDH12P55289 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.66□□□□□ -0.22
CDH12P55289 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CDH12P55289 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.66□□□□□ -0.22
CDH12P55289 RN7SL204P-201ENST00000582831 262 ntBASIC13.66□□□□□ -0.22
CDH12P55289 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.66□□□□□ -0.22
CDH12P55289 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.66□□□□□ -0.22
CDH12P55289 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.66□□□□□ -0.22
CDH12P55289 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH12P55289 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDH12P55289 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDH12P55289 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH12P55289 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
CDH12P55289 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CDH12P55289 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.66□□□□□ -0.22
CDH12P55289 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH12P55289 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CDH12P55289 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.66□□□□□ -0.22
CDH12P55289 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CDH12P55289 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH12P55289 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH12P55289 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CDH12P55289 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.66□□□□□ -0.22
CDH12P55289 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDH12P55289 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CDH12P55289 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CDH12P55289 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDH12P55289 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDH12P55289 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDH12P55289 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CDH12P55289 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH12P55289 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.65□□□□□ -0.22
CDH12P55289 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CDH12P55289 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH12P55289 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.65□□□□□ -0.22
CDH12P55289 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CDH12P55289 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH12P55289 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.65□□□□□ -0.22
CDH12P55289 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH12P55289 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CDH12P55289 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CDH12P55289 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CDH12P55289 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDH12P55289 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH12P55289 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH12P55289 AC090643.2-201ENST00000623442 2029 ntBASIC13.65□□□□□ -0.22
CDH12P55289 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDH12P55289 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH12P55289 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDH12P55289 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH12P55289 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH12P55289 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms