Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 COQ4-205ENST00000609948 956 ntTSL 2 BASIC11.91□□□□□ -0.5
RAB40CQ96S21 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC11.91□□□□□ -0.5
RAB40CQ96S21 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC11.91□□□□□ -0.5
RAB40CQ96S21 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
RAB40CQ96S21 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB40CQ96S21 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC11.91□□□□□ -0.5
RAB40CQ96S21 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAB40CQ96S21 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB40CQ96S21 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB40CQ96S21 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC11.91□□□□□ -0.5
RAB40CQ96S21 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC11.91□□□□□ -0.5
RAB40CQ96S21 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB40CQ96S21 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
RAB40CQ96S21 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB40CQ96S21 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB40CQ96S21 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
RAB40CQ96S21 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAB40CQ96S21 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
RAB40CQ96S21 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB40CQ96S21 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC11.91□□□□□ -0.5
RAB40CQ96S21 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAB40CQ96S21 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
RAB40CQ96S21 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
RAB40CQ96S21 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAB40CQ96S21 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB40CQ96S21 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB40CQ96S21 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC11.9□□□□□ -0.5
RAB40CQ96S21 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC11.9□□□□□ -0.5
RAB40CQ96S21 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
RAB40CQ96S21 AC003102.2-201ENST00000589195 1469 ntBASIC11.9□□□□□ -0.5
RAB40CQ96S21 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
RAB40CQ96S21 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC11.9□□□□□ -0.5
RAB40CQ96S21 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 AL139094.1-201ENST00000405549 1188 ntBASIC11.9□□□□□ -0.5
RAB40CQ96S21 SERF2-209ENST00000409646 559 ntTSL 4 BASIC11.9□□□□□ -0.5
RAB40CQ96S21 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 URGCP-206ENST00000446958 365 ntTSL 2 BASIC11.9□□□□□ -0.5
RAB40CQ96S21 AC026410.3-201ENST00000514280 936 ntBASIC11.9□□□□□ -0.5
RAB40CQ96S21 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC11.9□□□□□ -0.5
RAB40CQ96S21 SORD2P-201ENST00000558556 1069 ntBASIC11.9□□□□□ -0.5
RAB40CQ96S21 AC092337.1-201ENST00000568699 1129 ntBASIC11.9□□□□□ -0.5
RAB40CQ96S21 KRT18P8-201ENST00000581937 1246 ntBASIC11.9□□□□□ -0.5
RAB40CQ96S21 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC11.9□□□□□ -0.5
RAB40CQ96S21 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC11.9□□□□□ -0.5
RAB40CQ96S21 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 AL158212.4-201ENST00000624062 1286 ntBASIC11.9□□□□□ -0.5
RAB40CQ96S21 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
RAB40CQ96S21 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 NCLP1-201ENST00000445357 1963 ntBASIC11.9□□□□□ -0.5
RAB40CQ96S21 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC11.9□□□□□ -0.5
RAB40CQ96S21 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB40CQ96S21 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
RAB40CQ96S21 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
RAB40CQ96S21 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC11.9□□□□□ -0.51
RAB40CQ96S21 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
RAB40CQ96S21 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC11.9□□□□□ -0.51
RAB40CQ96S21 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
RAB40CQ96S21 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC11.9□□□□□ -0.51
RAB40CQ96S21 PTPRVP-205ENST00000641549 5067 ntBASIC11.9□□□□□ -0.51
RAB40CQ96S21 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
RAB40CQ96S21 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
RAB40CQ96S21 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
RAB40CQ96S21 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
RAB40CQ96S21 KHSRPP1-201ENST00000427983 1768 ntBASIC11.9□□□□□ -0.51
RAB40CQ96S21 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
RAB40CQ96S21 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
RAB40CQ96S21 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms