Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.82□□□□□ -0.36
TMEM54Q969K7 AL359881.2-201ENST00000602973 570 ntBASIC12.82□□□□□ -0.36
TMEM54Q969K7 AC021016.3-201ENST00000608367 477 ntBASIC12.82□□□□□ -0.36
TMEM54Q969K7 AP000346.4-201ENST00000614827 381 ntBASIC12.82□□□□□ -0.36
TMEM54Q969K7 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.82□□□□□ -0.36
TMEM54Q969K7 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM54Q969K7 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.82□□□□□ -0.36
TMEM54Q969K7 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM54Q969K7 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM54Q969K7 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM54Q969K7 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM54Q969K7 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM54Q969K7 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
TMEM54Q969K7 LAP3P2-201ENST00000454686 1454 ntBASIC12.82□□□□□ -0.36
TMEM54Q969K7 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM54Q969K7 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
TMEM54Q969K7 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM54Q969K7 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM54Q969K7 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
TMEM54Q969K7 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM54Q969K7 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM54Q969K7 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
TMEM54Q969K7 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM54Q969K7 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC12.82□□□□□ -0.36
TMEM54Q969K7 MBLAC2-202ENST00000514906 1936 ntBASIC12.82□□□□□ -0.36
TMEM54Q969K7 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.82□□□□□ -0.36
TMEM54Q969K7 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
TMEM54Q969K7 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
TMEM54Q969K7 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM54Q969K7 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM54Q969K7 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM54Q969K7 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TMEM54Q969K7 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM54Q969K7 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM54Q969K7 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.81□□□□□ -0.36
TMEM54Q969K7 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.81□□□□□ -0.36
TMEM54Q969K7 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM54Q969K7 AC090643.2-201ENST00000623442 2029 ntBASIC12.81□□□□□ -0.36
TMEM54Q969K7 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM54Q969K7 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM54Q969K7 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
TMEM54Q969K7 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.81□□□□□ -0.36
TMEM54Q969K7 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM54Q969K7 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
TMEM54Q969K7 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM54Q969K7 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.81□□□□□ -0.36
TMEM54Q969K7 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM54Q969K7 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM54Q969K7 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.81□□□□□ -0.36
TMEM54Q969K7 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM54Q969K7 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM54Q969K7 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM54Q969K7 SMS-201ENST00000379404 1174 ntTSL 3 BASIC12.81□□□□□ -0.36
TMEM54Q969K7 USP17L6P-201ENST00000382470 1197 ntBASIC12.81□□□□□ -0.36
TMEM54Q969K7 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC12.81□□□□□ -0.36
TMEM54Q969K7 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM54Q969K7 POM121L10P-201ENST00000436994 1285 ntBASIC12.81□□□□□ -0.36
TMEM54Q969K7 VDAC1P1-201ENST00000439229 848 ntBASIC12.81□□□□□ -0.36
TMEM54Q969K7 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.81□□□□□ -0.36
TMEM54Q969K7 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC12.81□□□□□ -0.36
TMEM54Q969K7 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC12.81□□□□□ -0.36
TMEM54Q969K7 RNMTL1P1-201ENST00000454103 560 ntBASIC12.81□□□□□ -0.36
TMEM54Q969K7 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC12.81□□□□□ -0.36
TMEM54Q969K7 RPL18P13-201ENST00000478088 569 ntBASIC12.81□□□□□ -0.36
TMEM54Q969K7 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM54Q969K7 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC12.81□□□□□ -0.36
TMEM54Q969K7 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM54Q969K7 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.81□□□□□ -0.36
TMEM54Q969K7 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC12.81□□□□□ -0.36
TMEM54Q969K7 BNIP3P13-201ENST00000599968 566 ntBASIC12.81□□□□□ -0.36
TMEM54Q969K7 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM54Q969K7 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM54Q969K7 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
TMEM54Q969K7 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM54Q969K7 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM54Q969K7 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
TMEM54Q969K7 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM54Q969K7 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM54Q969K7 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.81□□□□□ -0.36
TMEM54Q969K7 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM54Q969K7 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM54Q969K7 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM54Q969K7 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.8□□□□□ -0.36
TMEM54Q969K7 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM54Q969K7 AC007326.2-201ENST00000624224 7579 ntBASIC12.8□□□□□ -0.36
TMEM54Q969K7 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM54Q969K7 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM54Q969K7 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM54Q969K7 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM54Q969K7 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.8□□□□□ -0.36
TMEM54Q969K7 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM54Q969K7 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
TMEM54Q969K7 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM54Q969K7 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
TMEM54Q969K7 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.8□□□□□ -0.36
TMEM54Q969K7 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.8□□□□□ -0.36
TMEM54Q969K7 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM54Q969K7 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.8□□□□□ -0.36
TMEM54Q969K7 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TMEM54Q969K7 MST1P2-201ENST00000457982 2291 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms