Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 SPART-203ENST00000451493 4944 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 SLC25A13-202ENST00000416240 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 MUC20-205ENST00000447234 2589 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 AL157414.3-201ENST00000624276 1954 ntBASIC10.94□□□□□ -0.66
HIST1H2BDP58876 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 FGF23-201ENST00000237837 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 LILRB3-203ENST00000391750 2848 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 AC096564.1-201ENST00000499098 2810 ntTSL 2 BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 EHD1-213ENST00000621096 3336 ntTSL 5 BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 COX11P1-201ENST00000489116 835 ntBASIC10.94□□□□□ -0.66
HIST1H2BDP58876 NMU-205ENST00000511469 756 ntTSL 3 BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 BAP1-211ENST00000615113 489 ntBASIC10.94□□□□□ -0.66
HIST1H2BDP58876 RETREG3-201ENST00000309428 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 AC108024.1-201ENST00000626286 1721 ntBASIC10.94□□□□□ -0.66
HIST1H2BDP58876 POLR3E-219ENST00000615879 3655 ntTSL 2 BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 TXNRD1-201ENST00000354940 4082 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 PRKG2-201ENST00000264399 4822 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 PBOV1-201ENST00000527246 2506 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 AC135050.1-201ENST00000622229 3380 ntTSL 2 BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 TP53I11-220ENST00000533940 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 FAM184A-211ENST00000521531 3244 ntTSL 5 BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC10.94□□□□□ -0.66
HIST1H2BDP58876 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 NOSTRIN-203ENST00000397209 1437 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 BCKDK-204ENST00000394951 2164 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 NBN-203ENST00000409330 4523 ntTSL 5 BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 ANGEL2-208ENST00000535388 2517 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 MAN2C1-201ENST00000267978 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 SLA2-201ENST00000262866 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 SHC1-210ENST00000448116 3481 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 CACNB3-204ENST00000547230 2395 ntTSL 3 BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 FIS1-203ENST00000442303 631 ntTSL 3 BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 NME4-207ENST00000450036 985 ntTSL 3 BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 CDV3-207ENST00000508481 661 ntTSL 3 BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 AC015910.1-201ENST00000579400 975 ntBASIC10.93□□□□□ -0.66
HIST1H2BDP58876 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 AC025181.2-201ENST00000606994 802 ntBASIC10.93□□□□□ -0.66
HIST1H2BDP58876 HYMAI.1-201ENST00000620949 238 ntBASIC10.93□□□□□ -0.66
HIST1H2BDP58876 OTOA-203ENST00000388957 2703 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 TRO-202ENST00000319167 2326 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 TRO-203ENST00000375022 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 AC245100.6-201ENST00000427169 1918 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
HIST1H2BDP58876 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms