RNA–Protein interactions for RNA: ENST00000541640.5

PRKAB1-206, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,303 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-206ENST00000541640 NISCHQ9Y2I1 1504 aa28.16■■■□□ 2.1
PRKAB1-206ENST00000541640 CCDC180Q9P1Z9 1646 aa24.16■■□□□ 1.46
PRKAB1-206ENST00000541640 ZCCHC6Q5VYS8 1495 aaKnown RBP23.81■■□□□ 1.4
PRKAB1-206ENST00000541640 SHROOM4Q9ULL8 1493 aa23.59■■□□□ 1.37
PRKAB1-206ENST00000541640 DCAF1Q9Y4B6 1507 aa23.24■■□□□ 1.31
PRKAB1-206ENST00000541640 SUPT5HO00267 1087 aaKnown RBP23.06■■□□□ 1.28
PRKAB1-206ENST00000541640 DCAF8L2P0C7V8 631 aa23.06■■□□□ 1.28
PRKAB1-206ENST00000541640 ABCC9O60706 1549 aa22.98■■□□□ 1.27
PRKAB1-206ENST00000541640 MYO15BQ96JP2 1530 aa22.66■■□□□ 1.22
PRKAB1-206ENST00000541640 CHIC1Q5VXU3 224 aa22.47■■□□□ 1.19
PRKAB1-206ENST00000541640 NACADO15069 1562 aa22.45■■□□□ 1.19
PRKAB1-206ENST00000541640 SCRIBQ14160 1630 aa22.4■■□□□ 1.18
PRKAB1-206ENST00000541640 RB1CC1Q8TDY2 1594 aa22.33■■□□□ 1.16
PRKAB1-206ENST00000541640 RSF1Q96T23 1441 aaPredicted RBP22.16■■□□□ 1.14
PRKAB1-206ENST00000541640 UNC13AQ9UPW8 1703 aa21.87■■□□□ 1.09
PRKAB1-206ENST00000541640 CECR2Q9BXF3 1484 aa21.87■■□□□ 1.09
PRKAB1-206ENST00000541640 MROH2BQ7Z745 1585 aa21.82■■□□□ 1.08
PRKAB1-206ENST00000541640 WIZO95785 1651 aa21.71■■□□□ 1.07
PRKAB1-206ENST00000541640 LOC105371045A0A1W2PR82 267 aa21.68■■□□□ 1.06
PRKAB1-206ENST00000541640 BAZ1AQ9NRL2 1556 aaPredicted RBP21.67■■□□□ 1.06
PRKAB1-206ENST00000541640 PABPN1Q86U42 306 aaKnown RBP eCLIP21.66■■□□□ 1.06
PRKAB1-206ENST00000541640 BICRAQ9NZM4 1560 aa21.64■■□□□ 1.06
PRKAB1-206ENST00000541640 TRIM41Q8WV44 630 aa21.59■■□□□ 1.05
PRKAB1-206ENST00000541640 SMARCA4P51532 1647 aa21.5■■□□□ 1.03
PRKAB1-206ENST00000541640 HRCP23327 699 aa21.49■■□□□ 1.03
PRKAB1-206ENST00000541640 PCGF6Q9BYE7 350 aa21.49■■□□□ 1.03
PRKAB1-206ENST00000541640 EIF4G1Q04637 1599 aaKnown RBP21.45■■□□□ 1.02
PRKAB1-206ENST00000541640 TOP2AP11388 1531 aaKnown RBP21.44■■□□□ 1.02
PRKAB1-206ENST00000541640 SMARCA2P51531 1590 aa21.29■■□□□ 1
PRKAB1-206ENST00000541640 FAM9AQ8IZU1 332 aaPredicted RBP21.27■□□□□ 0.99
PRKAB1-206ENST00000541640 CCDC88BA6NC98 1476 aa21.27■□□□□ 0.99
PRKAB1-206ENST00000541640 TRIM26Q12899 539 aaPredicted RBP21.26■□□□□ 0.99
PRKAB1-206ENST00000541640 PEG3Q9GZU2 1588 aa21.18■□□□□ 0.98
PRKAB1-206ENST00000541640 ABCC8Q09428 1581 aa21.1■□□□□ 0.97
PRKAB1-206ENST00000541640 EHMT2Q96KQ7 1210 aa20.98■□□□□ 0.95
PRKAB1-206ENST00000541640 ATAD2BQ9ULI0 1458 aa20.94■□□□□ 0.94
PRKAB1-206ENST00000541640 PPARGC1BQ86YN6 1023 aaKnown RBP20.92■□□□□ 0.94
PRKAB1-206ENST00000541640 EEA1Q15075 1411 aa20.9■□□□□ 0.94
PRKAB1-206ENST00000541640 BAZ1BQ9UIG0 1483 aaKnown RBP20.87■□□□□ 0.93
PRKAB1-206ENST00000541640 SOGA1O94964 1423 aa20.85■□□□□ 0.93
PRKAB1-206ENST00000541640 WRNQ14191 1432 aaPredicted RBP eCLIP20.82■□□□□ 0.92
PRKAB1-206ENST00000541640 ZEB1P37275 1124 aaPredicted RBP20.78■□□□□ 0.92
PRKAB1-206ENST00000541640 CC2D2AQ9P2K1 1620 aa20.77■□□□□ 0.92
PRKAB1-206ENST00000541640 TNIKQ9UKE5 1360 aa20.76■□□□□ 0.91
PRKAB1-206ENST00000541640 RUSC2Q8N2Y8 1516 aa20.75■□□□□ 0.91
PRKAB1-206ENST00000541640 SYNJ1O43426 1573 aa20.74■□□□□ 0.91
PRKAB1-206ENST00000541640 CSRNP3Q8WYN3 585 aa20.74■□□□□ 0.91
PRKAB1-206ENST00000541640 CEP162Q5TB80 1403 aa20.72■□□□□ 0.91
PRKAB1-206ENST00000541640 NCAPD3P42695 1498 aa20.72■□□□□ 0.91
PRKAB1-206ENST00000541640 HMGXB3Q12766 1538 aa20.67■□□□□ 0.9
PRKAB1-206ENST00000541640 GOLGA3Q08378 1498 aa20.67■□□□□ 0.9
PRKAB1-206ENST00000541640 KIF21BO75037 1637 aa20.62■□□□□ 0.89
PRKAB1-206ENST00000541640 CEP164Q9UPV0 1460 aa20.59■□□□□ 0.89
PRKAB1-206ENST00000541640 TOP2BQ02880 1626 aa20.57■□□□□ 0.88
PRKAB1-206ENST00000541640 UBTFP17480 764 aaKnown RBP20.56■□□□□ 0.88
PRKAB1-206ENST00000541640 BIVM-ERCC5R4GMW8 1640 aa20.54■□□□□ 0.88
PRKAB1-206ENST00000541640 DNAJC5BQ9UF47 199 aa20.43■□□□□ 0.86
PRKAB1-206ENST00000541640 RAPGEF2Q9Y4G8 1499 aa20.38■□□□□ 0.85
PRKAB1-206ENST00000541640 CFTRP13569 1480 aa20.38■□□□□ 0.85
PRKAB1-206ENST00000541640 CLIP1P30622 1438 aa20.38■□□□□ 0.85
PRKAB1-206ENST00000541640 CUX1P39880 1505 aa20.34■□□□□ 0.85
PRKAB1-206ENST00000541640 PRDM2Q13029 1718 aa20.34■□□□□ 0.85
PRKAB1-206ENST00000541640 ERICH3Q5RHP9 1530 aa20.32■□□□□ 0.84
PRKAB1-206ENST00000541640 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.32■□□□□ 0.84
PRKAB1-206ENST00000541640 VPS8Q8N3P4 1428 aa20.31■□□□□ 0.84
PRKAB1-206ENST00000541640 CCER1Q8TC90 406 aaPredicted RBP20.3■□□□□ 0.84
PRKAB1-206ENST00000541640 PRXQ9BXM0 1461 aa20.29■□□□□ 0.84
PRKAB1-206ENST00000541640 TTBK1Q5TCY1 1321 aaPredicted RBP20.28■□□□□ 0.84
PRKAB1-206ENST00000541640 KIF27Q86VH2 1401 aa20.21■□□□□ 0.83
PRKAB1-206ENST00000541640 CADPSQ9ULU8 1353 aa20.19■□□□□ 0.82
PRKAB1-206ENST00000541640 NESP48681 1621 aa20.11■□□□□ 0.81
PRKAB1-206ENST00000541640 APLP2Q06481 763 aa20.1■□□□□ 0.81
PRKAB1-206ENST00000541640 ARAP1Q96P48 1450 aa20.1■□□□□ 0.81
PRKAB1-206ENST00000541640 LAMC3Q9Y6N6 1575 aa20.06■□□□□ 0.8
PRKAB1-206ENST00000541640 RANGAP1P46060 587 aaPredicted RBP20.04■□□□□ 0.8
PRKAB1-206ENST00000541640 CUX2O14529 1486 aa20.01■□□□□ 0.79
PRKAB1-206ENST00000541640 FGD5Q6ZNL6 1462 aa19.99■□□□□ 0.79
PRKAB1-206ENST00000541640 FANCD2Q9BXW9 1451 aa19.99■□□□□ 0.79
PRKAB1-206ENST00000541640 IGF1RP08069 1367 aa19.97■□□□□ 0.79
PRKAB1-206ENST00000541640 HNRNPUL2Q1KMD3 747 aaKnown RBP19.96■□□□□ 0.79
PRKAB1-206ENST00000541640 ARHGAP35Q9NRY4 1499 aa19.95■□□□□ 0.78
PRKAB1-206ENST00000541640 PDS5BQ9NTI5 1447 aa19.93■□□□□ 0.78
PRKAB1-206ENST00000541640 DNMBPQ6XZF7 1577 aa19.9■□□□□ 0.78
PRKAB1-206ENST00000541640 CARMIL1Q5VZK9 1371 aa19.88■□□□□ 0.77
PRKAB1-206ENST00000541640 KIF21AQ7Z4S6 1674 aa19.86■□□□□ 0.77
PRKAB1-206ENST00000541640 KANK4Q5T7N3 995 aaPredicted RBP19.85■□□□□ 0.77
PRKAB1-206ENST00000541640 RRBP1Q9P2E9 1410 aaKnown RBP19.84■□□□□ 0.77
PRKAB1-206ENST00000541640 TOPBP1Q92547 1522 aa19.82■□□□□ 0.76
PRKAB1-206ENST00000541640 DIEXFQ68CQ4 756 aaKnown RBP19.82■□□□□ 0.76
PRKAB1-206ENST00000541640 ABCA10Q8WWZ4 1543 aa19.82■□□□□ 0.76
PRKAB1-206ENST00000541640 MAP3K1Q13233 1512 aa19.8■□□□□ 0.76
PRKAB1-206ENST00000541640 POLA1P09884 1462 aaPredicted RBP19.78■□□□□ 0.76
PRKAB1-206ENST00000541640 ZNF316A6NFI3 1004 aaPredicted RBP19.77■□□□□ 0.76
PRKAB1-206ENST00000541640 RAD54L2Q9Y4B4 1467 aa19.75■□□□□ 0.75
PRKAB1-206ENST00000541640 TIAM1Q13009 1591 aa19.75■□□□□ 0.75
PRKAB1-206ENST00000541640 CLSPNQ9HAW4 1339 aa19.74■□□□□ 0.75
PRKAB1-206ENST00000541640 CUL7Q14999 1698 aa19.74■□□□□ 0.75
PRKAB1-206ENST00000541640 ERCC6Q03468 1493 aa19.74■□□□□ 0.75
PRKAB1-206ENST00000541640 URB2Q14146 1524 aaKnown RBP19.74■□□□□ 0.75
PRKAB1-206ENST00000541640 WDR97A6NE52 1622 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms