Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HTR1EP28566 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
HTR1EP28566 AL138799.1-201ENST00000448213 1675 ntBASIC14.07□□□□□ -0.16
HTR1EP28566 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HTR1EP28566 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
HTR1EP28566 AC090643.2-201ENST00000623442 2029 ntBASIC14.07□□□□□ -0.16
HTR1EP28566 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HTR1EP28566 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
HTR1EP28566 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR1EP28566 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.06□□□□□ -0.16
HTR1EP28566 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HTR1EP28566 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR1EP28566 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR1EP28566 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR1EP28566 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR1EP28566 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR1EP28566 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR1EP28566 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR1EP28566 AC099521.3-201ENST00000624251 2938 ntBASIC14.06□□□□□ -0.16
HTR1EP28566 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.06□□□□□ -0.16
HTR1EP28566 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR1EP28566 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR1EP28566 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR1EP28566 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR1EP28566 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR1EP28566 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
HTR1EP28566 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC14.06□□□□□ -0.16
HTR1EP28566 NUS1P3-201ENST00000423502 862 ntBASIC14.06□□□□□ -0.16
HTR1EP28566 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.06□□□□□ -0.16
HTR1EP28566 AL442647.2-201ENST00000429864 857 ntBASIC14.06□□□□□ -0.16
HTR1EP28566 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.06□□□□□ -0.16
HTR1EP28566 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.06□□□□□ -0.16
HTR1EP28566 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
HTR1EP28566 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
HTR1EP28566 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.06□□□□□ -0.16
HTR1EP28566 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.06□□□□□ -0.16
HTR1EP28566 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.06□□□□□ -0.16
HTR1EP28566 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HTR1EP28566 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.06□□□□□ -0.16
HTR1EP28566 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.06□□□□□ -0.16
HTR1EP28566 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.06□□□□□ -0.16
HTR1EP28566 AL158212.4-201ENST00000624062 1286 ntBASIC14.06□□□□□ -0.16
HTR1EP28566 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR1EP28566 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR1EP28566 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR1EP28566 CICP20-201ENST00000443330 2801 ntBASIC14.06□□□□□ -0.16
HTR1EP28566 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HTR1EP28566 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR1EP28566 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HTR1EP28566 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR1EP28566 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR1EP28566 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HTR1EP28566 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
HTR1EP28566 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
HTR1EP28566 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.06□□□□□ -0.16
HTR1EP28566 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.06□□□□□ -0.16
HTR1EP28566 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HTR1EP28566 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.06□□□□□ -0.16
HTR1EP28566 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HTR1EP28566 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.06□□□□□ -0.16
HTR1EP28566 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.06□□□□□ -0.16
HTR1EP28566 PTENP1-202ENST00000532280 3996 ntBASIC14.06□□□□□ -0.16
HTR1EP28566 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HTR1EP28566 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
HTR1EP28566 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
HTR1EP28566 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HTR1EP28566 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.05□□□□□ -0.16
HTR1EP28566 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
HTR1EP28566 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
HTR1EP28566 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HTR1EP28566 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
HTR1EP28566 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HTR1EP28566 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.05□□□□□ -0.16
HTR1EP28566 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.05□□□□□ -0.16
HTR1EP28566 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.05□□□□□ -0.16
HTR1EP28566 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.05□□□□□ -0.16
HTR1EP28566 RPL7P3-201ENST00000441388 714 ntBASIC14.05□□□□□ -0.16
HTR1EP28566 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.05□□□□□ -0.16
HTR1EP28566 AC108725.1-201ENST00000495472 409 ntBASIC14.05□□□□□ -0.16
HTR1EP28566 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.05□□□□□ -0.16
HTR1EP28566 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HTR1EP28566 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.05□□□□□ -0.16
HTR1EP28566 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HTR1EP28566 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.05□□□□□ -0.16
HTR1EP28566 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
HTR1EP28566 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HTR1EP28566 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.05□□□□□ -0.16
HTR1EP28566 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HTR1EP28566 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
HTR1EP28566 AL591122.2-201ENST00000624125 1853 ntBASIC14.05□□□□□ -0.16
HTR1EP28566 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
HTR1EP28566 AC087386.2-201ENST00000623212 4637 ntBASIC14.05□□□□□ -0.16
HTR1EP28566 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HTR1EP28566 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.05□□□□□ -0.16
HTR1EP28566 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.05□□□□□ -0.16
HTR1EP28566 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.05□□□□□ -0.16
HTR1EP28566 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.05□□□□□ -0.16
HTR1EP28566 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HTR1EP28566 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
HTR1EP28566 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms