Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.91□□□□□ -0.18
COL21A1Q96P44 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
COL21A1Q96P44 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
COL21A1Q96P44 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.91□□□□□ -0.18
COL21A1Q96P44 TCAF1P1-201ENST00000414990 2232 ntBASIC13.91□□□□□ -0.18
COL21A1Q96P44 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL21A1Q96P44 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
COL21A1Q96P44 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL21A1Q96P44 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
COL21A1Q96P44 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
COL21A1Q96P44 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
COL21A1Q96P44 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL21A1Q96P44 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.91□□□□□ -0.18
COL21A1Q96P44 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
COL21A1Q96P44 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.9□□□□□ -0.18
COL21A1Q96P44 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL21A1Q96P44 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
COL21A1Q96P44 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.9□□□□□ -0.18
COL21A1Q96P44 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
COL21A1Q96P44 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL21A1Q96P44 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL21A1Q96P44 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL21A1Q96P44 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.9□□□□□ -0.18
COL21A1Q96P44 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL21A1Q96P44 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.9□□□□□ -0.18
COL21A1Q96P44 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COL21A1Q96P44 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL21A1Q96P44 TPM3P8-201ENST00000330554 643 ntBASIC13.9□□□□□ -0.18
COL21A1Q96P44 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
COL21A1Q96P44 BOLA2P3-201ENST00000404566 256 ntBASIC13.9□□□□□ -0.18
COL21A1Q96P44 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.9□□□□□ -0.18
COL21A1Q96P44 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.9□□□□□ -0.18
COL21A1Q96P44 U91328.1-201ENST00000437528 223 ntBASIC13.9□□□□□ -0.18
COL21A1Q96P44 AC245100.3-201ENST00000441281 285 ntBASIC13.9□□□□□ -0.18
COL21A1Q96P44 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.9□□□□□ -0.18
COL21A1Q96P44 GPR53P-205ENST00000457298 1084 ntBASIC13.9□□□□□ -0.18
COL21A1Q96P44 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
COL21A1Q96P44 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.9□□□□□ -0.18
COL21A1Q96P44 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL21A1Q96P44 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.9□□□□□ -0.18
COL21A1Q96P44 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COL21A1Q96P44 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COL21A1Q96P44 SALL4P5-201ENST00000419001 1760 ntBASIC13.9□□□□□ -0.18
COL21A1Q96P44 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
COL21A1Q96P44 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.9□□□□□ -0.18
COL21A1Q96P44 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COL21A1Q96P44 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL21A1Q96P44 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL21A1Q96P44 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL21A1Q96P44 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL21A1Q96P44 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL21A1Q96P44 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
COL21A1Q96P44 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COL21A1Q96P44 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.9□□□□□ -0.18
COL21A1Q96P44 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL21A1Q96P44 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COL21A1Q96P44 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.9□□□□□ -0.18
COL21A1Q96P44 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL21A1Q96P44 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
COL21A1Q96P44 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
COL21A1Q96P44 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
COL21A1Q96P44 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
COL21A1Q96P44 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
COL21A1Q96P44 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL21A1Q96P44 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL21A1Q96P44 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL21A1Q96P44 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
COL21A1Q96P44 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL21A1Q96P44 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COL21A1Q96P44 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL21A1Q96P44 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL21A1Q96P44 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL21A1Q96P44 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL21A1Q96P44 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL21A1Q96P44 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.89□□□□□ -0.19
COL21A1Q96P44 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL21A1Q96P44 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL21A1Q96P44 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COL21A1Q96P44 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL21A1Q96P44 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.89□□□□□ -0.19
COL21A1Q96P44 AC007969.1-201ENST00000433675 447 ntBASIC13.89□□□□□ -0.19
COL21A1Q96P44 FO681548.1-201ENST00000455617 1132 ntBASIC13.89□□□□□ -0.19
COL21A1Q96P44 CROCCP4-201ENST00000457096 498 ntBASIC13.89□□□□□ -0.19
COL21A1Q96P44 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
COL21A1Q96P44 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.89□□□□□ -0.19
COL21A1Q96P44 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.89□□□□□ -0.19
COL21A1Q96P44 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.89□□□□□ -0.19
COL21A1Q96P44 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.89□□□□□ -0.19
COL21A1Q96P44 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.89□□□□□ -0.19
COL21A1Q96P44 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.89□□□□□ -0.19
COL21A1Q96P44 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.89□□□□□ -0.19
COL21A1Q96P44 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL21A1Q96P44 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL21A1Q96P44 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.89□□□□□ -0.19
COL21A1Q96P44 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.89□□□□□ -0.19
COL21A1Q96P44 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.89□□□□□ -0.19
COL21A1Q96P44 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
COL21A1Q96P44 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
COL21A1Q96P44 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COL21A1Q96P44 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms