Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 LINC02084-201ENST00000606069 1096 ntBASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 RHOXF1P1-202ENST00000635473 501 ntBASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 AC009093.2-202ENST00000620513 2079 ntBASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 AC215219.1-201ENST00000400706 1817 ntBASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 AL035414.1-201ENST00000451327 857 ntBASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 AP003171.2-201ENST00000528208 925 ntBASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 AC079316.1-201ENST00000548397 411 ntBASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 AC012645.4-201ENST00000610691 1061 ntBASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 ZACNP1-201ENST00000612259 710 ntBASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 RN7SL832P-201ENST00000607781 1756 ntBASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 WARS-203ENST00000358655 2466 ntTSL 2 BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TTC9CQ8N5M4 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TTC9CQ8N5M4 AHCYP2-201ENST00000430630 1300 ntBASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms