Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 AC106881.1-201ENST00000605849 3329 ntBASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 TMBIM7P-202ENST00000641474 1516 ntBASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 RNA5SP359-201ENST00000364838 113 ntBASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 AL157792.1-201ENST00000488281 530 ntBASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 AC003686.1-201ENST00000550956 1034 ntBASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 NUDT4P2-201ENST00000578341 546 ntBASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 MIR4522-201ENST00000584932 87 ntBASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 AL132780.4-201ENST00000624870 1135 ntBASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 AC013726.1-201ENST00000563747 2285 ntBASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 AC023024.2-201ENST00000623561 1993 ntBASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.82□□□□□ -0.04
SYNPOQ8N3V7 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 MROH4P-201ENST00000431302 1578 ntBASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 RPL13AP19-201ENST00000434320 584 ntBASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 AC012362.1-201ENST00000434906 739 ntBASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 LYPLA2P1-203ENST00000447689 696 ntBASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 RN7SL530P-201ENST00000485097 298 ntBASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 LINC00528-201ENST00000600723 2160 ntBASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.81□□□□□ -0.04
SYNPOQ8N3V7 MARK2P16-201ENST00000605714 1723 ntBASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms