Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HMGCLP35914 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HMGCLP35914 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
HMGCLP35914 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HMGCLP35914 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.52□□□□□ -0.09
HMGCLP35914 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
HMGCLP35914 SNX18-202ENST00000343017 3140 ntBASIC14.52□□□□□ -0.09
HMGCLP35914 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
HMGCLP35914 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.52□□□□□ -0.09
HMGCLP35914 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
HMGCLP35914 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.51□□□□□ -0.09
HMGCLP35914 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HMGCLP35914 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCLP35914 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCLP35914 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCLP35914 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCLP35914 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
HMGCLP35914 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
HMGCLP35914 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCLP35914 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCLP35914 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCLP35914 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCLP35914 AHCYP4-201ENST00000419201 1315 ntBASIC14.51□□□□□ -0.09
HMGCLP35914 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.51□□□□□ -0.09
HMGCLP35914 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HMGCLP35914 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCLP35914 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.51□□□□□ -0.09
HMGCLP35914 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.51□□□□□ -0.09
HMGCLP35914 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCLP35914 DPM3-202ENST00000368399 517 ntBASIC14.51□□□□□ -0.09
HMGCLP35914 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.51□□□□□ -0.09
HMGCLP35914 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.51□□□□□ -0.09
HMGCLP35914 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.51□□□□□ -0.09
HMGCLP35914 SCARNA21-201ENST00000517026 139 ntBASIC14.51□□□□□ -0.09
HMGCLP35914 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCLP35914 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.51□□□□□ -0.09
HMGCLP35914 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.51□□□□□ -0.09
HMGCLP35914 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.51□□□□□ -0.09
HMGCLP35914 AC008805.1-201ENST00000590892 364 ntBASIC14.51□□□□□ -0.09
HMGCLP35914 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.51□□□□□ -0.09
HMGCLP35914 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCLP35914 AL136295.7-201ENST00000619226 1200 ntBASIC14.51□□□□□ -0.09
HMGCLP35914 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCLP35914 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
HMGCLP35914 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
HMGCLP35914 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HMGCLP35914 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCLP35914 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
HMGCLP35914 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.51□□□□□ -0.09
HMGCLP35914 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCLP35914 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCLP35914 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCLP35914 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCLP35914 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
HMGCLP35914 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
HMGCLP35914 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCLP35914 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCLP35914 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCLP35914 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
HMGCLP35914 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCLP35914 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCLP35914 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.5□□□□□ -0.09
HMGCLP35914 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCLP35914 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.5□□□□□ -0.09
HMGCLP35914 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
HMGCLP35914 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCLP35914 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
HMGCLP35914 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCLP35914 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCLP35914 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
HMGCLP35914 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
HMGCLP35914 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
HMGCLP35914 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
HMGCLP35914 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCLP35914 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.5□□□□□ -0.09
HMGCLP35914 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
HMGCLP35914 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.5□□□□□ -0.09
HMGCLP35914 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.5□□□□□ -0.09
HMGCLP35914 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.5□□□□□ -0.09
HMGCLP35914 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.5□□□□□ -0.09
HMGCLP35914 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.5□□□□□ -0.09
HMGCLP35914 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.5□□□□□ -0.09
HMGCLP35914 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.5□□□□□ -0.09
HMGCLP35914 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.5□□□□□ -0.09
HMGCLP35914 AC124068.2-201ENST00000569473 1109 ntBASIC14.5□□□□□ -0.09
HMGCLP35914 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.5□□□□□ -0.09
HMGCLP35914 RN7SL219P-201ENST00000582872 296 ntBASIC14.5□□□□□ -0.09
HMGCLP35914 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCLP35914 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.5□□□□□ -0.09
HMGCLP35914 AC090164.2-201ENST00000611487 516 ntBASIC14.5□□□□□ -0.09
HMGCLP35914 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
HMGCLP35914 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.5□□□□□ -0.09
HMGCLP35914 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.5□□□□□ -0.09
HMGCLP35914 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCLP35914 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCLP35914 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCLP35914 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCLP35914 AC016397.2-201ENST00000624848 1985 ntBASIC14.5□□□□□ -0.09
HMGCLP35914 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCLP35914 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 245.3 ms