Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PDE6BP35913 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDE6BP35913 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PDE6BP35913 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PDE6BP35913 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PDE6BP35913 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC17.78■□□□□ 0.44
PDE6BP35913 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDE6BP35913 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDE6BP35913 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDE6BP35913 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.78■□□□□ 0.44
PDE6BP35913 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
PDE6BP35913 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PDE6BP35913 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDE6BP35913 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDE6BP35913 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC17.78■□□□□ 0.44
PDE6BP35913 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
PDE6BP35913 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
PDE6BP35913 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC17.78■□□□□ 0.44
PDE6BP35913 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDE6BP35913 AC026470.1-201ENST00000478038 846 ntBASIC17.78■□□□□ 0.44
PDE6BP35913 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC17.78■□□□□ 0.44
PDE6BP35913 OR2A1-AS1-210ENST00000496968 531 ntBASIC17.78■□□□□ 0.44
PDE6BP35913 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDE6BP35913 IGHV1-12-201ENST00000518307 205 ntBASIC17.78■□□□□ 0.44
PDE6BP35913 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC17.78■□□□□ 0.44
PDE6BP35913 NAA40-205ENST00000539656 577 ntTSL 4 BASIC17.78■□□□□ 0.44
PDE6BP35913 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC17.78■□□□□ 0.44
PDE6BP35913 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC17.78■□□□□ 0.44
PDE6BP35913 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC17.78■□□□□ 0.44
PDE6BP35913 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDE6BP35913 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PDE6BP35913 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDE6BP35913 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC17.78■□□□□ 0.44
PDE6BP35913 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDE6BP35913 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDE6BP35913 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC17.78■□□□□ 0.44
PDE6BP35913 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDE6BP35913 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PDE6BP35913 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDE6BP35913 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDE6BP35913 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDE6BP35913 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.77■□□□□ 0.44
PDE6BP35913 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDE6BP35913 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDE6BP35913 LINC00528-201ENST00000600723 2160 ntBASIC17.77■□□□□ 0.44
PDE6BP35913 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
PDE6BP35913 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
PDE6BP35913 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDE6BP35913 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PDE6BP35913 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PDE6BP35913 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
PDE6BP35913 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PDE6BP35913 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDE6BP35913 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
PDE6BP35913 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDE6BP35913 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDE6BP35913 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDE6BP35913 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
PDE6BP35913 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDE6BP35913 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDE6BP35913 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDE6BP35913 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDE6BP35913 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC17.77■□□□□ 0.44
PDE6BP35913 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PDE6BP35913 LINC00265-2P-201ENST00000413372 782 ntBASIC17.77■□□□□ 0.44
PDE6BP35913 KRT18P46-201ENST00000435568 1279 ntBASIC17.77■□□□□ 0.44
PDE6BP35913 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC17.77■□□□□ 0.44
PDE6BP35913 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC17.77■□□□□ 0.44
PDE6BP35913 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC17.77■□□□□ 0.44
PDE6BP35913 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC17.77■□□□□ 0.44
PDE6BP35913 AC090136.2-201ENST00000517809 420 ntBASIC17.77■□□□□ 0.44
PDE6BP35913 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDE6BP35913 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDE6BP35913 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
PDE6BP35913 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC17.77■□□□□ 0.44
PDE6BP35913 CYP4F36P-201ENST00000589193 186 ntBASIC17.77■□□□□ 0.44
PDE6BP35913 AP005264.5-201ENST00000590066 467 ntBASIC17.77■□□□□ 0.44
PDE6BP35913 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDE6BP35913 RPS5-204ENST00000598098 536 ntTSL 2 BASIC17.77■□□□□ 0.44
PDE6BP35913 AL359091.4-201ENST00000610052 409 ntBASIC17.77■□□□□ 0.44
PDE6BP35913 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDE6BP35913 ZNF436-AS1-201ENST00000335648 2547 ntBASIC17.77■□□□□ 0.44
PDE6BP35913 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC17.77■□□□□ 0.44
PDE6BP35913 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PDE6BP35913 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDE6BP35913 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDE6BP35913 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDE6BP35913 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDE6BP35913 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.77■□□□□ 0.43
PDE6BP35913 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDE6BP35913 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.77■□□□□ 0.43
PDE6BP35913 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PDE6BP35913 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC17.77■□□□□ 0.43
PDE6BP35913 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC17.77■□□□□ 0.43
PDE6BP35913 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PDE6BP35913 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PDE6BP35913 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.77■□□□□ 0.43
PDE6BP35913 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PDE6BP35913 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDE6BP35913 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms