Protein–RNA interactions for Protein: P04183

TK1, Thymidine kinase, cytosolic, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TK1P04183 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TK1P04183 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.58□□□□□ -0.4
TK1P04183 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.58□□□□□ -0.4
TK1P04183 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
TK1P04183 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TK1P04183 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
TK1P04183 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.58□□□□□ -0.4
TK1P04183 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TK1P04183 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TK1P04183 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TK1P04183 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TK1P04183 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.58□□□□□ -0.4
TK1P04183 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TK1P04183 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.58□□□□□ -0.4
TK1P04183 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TK1P04183 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TK1P04183 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TK1P04183 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TK1P04183 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TK1P04183 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TK1P04183 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.57□□□□□ -0.4
TK1P04183 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TK1P04183 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TK1P04183 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TK1P04183 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
TK1P04183 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TK1P04183 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
TK1P04183 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TK1P04183 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TK1P04183 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TK1P04183 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TK1P04183 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TK1P04183 AGGF1P1-201ENST00000509500 2073 ntBASIC12.57□□□□□ -0.4
TK1P04183 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.57□□□□□ -0.4
TK1P04183 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TK1P04183 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TK1P04183 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TK1P04183 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
TK1P04183 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
TK1P04183 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TK1P04183 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
TK1P04183 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TK1P04183 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TK1P04183 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TK1P04183 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TK1P04183 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TK1P04183 EDF1-203ENST00000371649 790 ntTSL 2 BASIC12.57□□□□□ -0.4
TK1P04183 AL512384.1-201ENST00000406683 331 ntBASIC12.57□□□□□ -0.4
TK1P04183 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
TK1P04183 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC12.57□□□□□ -0.4
TK1P04183 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.57□□□□□ -0.4
TK1P04183 AL355864.2-201ENST00000447420 863 ntBASIC12.57□□□□□ -0.4
TK1P04183 INE1-201ENST00000456273 945 ntBASIC12.57□□□□□ -0.4
TK1P04183 AC026434.2-201ENST00000506094 1078 ntBASIC12.57□□□□□ -0.4
TK1P04183 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.57□□□□□ -0.4
TK1P04183 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
TK1P04183 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC12.57□□□□□ -0.4
TK1P04183 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.57□□□□□ -0.4
TK1P04183 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TK1P04183 AC015936.2-201ENST00000593177 259 ntBASIC12.57□□□□□ -0.4
TK1P04183 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC12.57□□□□□ -0.4
TK1P04183 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
TK1P04183 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TK1P04183 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TK1P04183 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.57□□□□□ -0.4
TK1P04183 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TK1P04183 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TK1P04183 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TK1P04183 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TK1P04183 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TK1P04183 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.57□□□□□ -0.4
TK1P04183 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TK1P04183 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TK1P04183 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.57□□□□□ -0.4
TK1P04183 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TK1P04183 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.57□□□□□ -0.4
TK1P04183 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TK1P04183 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
TK1P04183 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
TK1P04183 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TK1P04183 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
TK1P04183 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.57□□□□□ -0.4
TK1P04183 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TK1P04183 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TK1P04183 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TK1P04183 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TK1P04183 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TK1P04183 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TK1P04183 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.56□□□□□ -0.4
TK1P04183 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.56□□□□□ -0.4
TK1P04183 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
TK1P04183 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.56□□□□□ -0.4
TK1P04183 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TK1P04183 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
TK1P04183 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
TK1P04183 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.56□□□□□ -0.4
TK1P04183 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
TK1P04183 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TK1P04183 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TK1P04183 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms