Protein–RNA interactions for Protein: O60504

SORBS3, Vinexin, humanhuman

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3O60504 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.47■□□□□ 0.23
SORBS3O60504 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SORBS3O60504 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SORBS3O60504 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SORBS3O60504 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SORBS3O60504 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.47■□□□□ 0.23
SORBS3O60504 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SORBS3O60504 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
SORBS3O60504 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SORBS3O60504 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SORBS3O60504 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SORBS3O60504 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SORBS3O60504 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.46■□□□□ 0.23
SORBS3O60504 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SORBS3O60504 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
SORBS3O60504 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.46■□□□□ 0.23
SORBS3O60504 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
SORBS3O60504 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.46■□□□□ 0.23
SORBS3O60504 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SORBS3O60504 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
SORBS3O60504 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
SORBS3O60504 ELK2AP-201ENST00000392510 1007 ntBASIC16.46■□□□□ 0.23
SORBS3O60504 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.46■□□□□ 0.23
SORBS3O60504 CEP164P1-201ENST00000455142 418 ntBASIC16.46■□□□□ 0.23
SORBS3O60504 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.46■□□□□ 0.23
SORBS3O60504 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.46■□□□□ 0.23
SORBS3O60504 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.46■□□□□ 0.23
SORBS3O60504 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC16.46■□□□□ 0.23
SORBS3O60504 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.46■□□□□ 0.23
SORBS3O60504 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
SORBS3O60504 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SORBS3O60504 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SORBS3O60504 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16.46■□□□□ 0.23
SORBS3O60504 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.46■□□□□ 0.23
SORBS3O60504 MEG3_2.1-201ENST00000611456 105 ntBASIC16.46■□□□□ 0.23
SORBS3O60504 AL353770.1-201ENST00000614915 403 ntBASIC16.46■□□□□ 0.23
SORBS3O60504 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SORBS3O60504 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SORBS3O60504 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SORBS3O60504 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SORBS3O60504 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SORBS3O60504 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SORBS3O60504 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.46■□□□□ 0.23
SORBS3O60504 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.46■□□□□ 0.23
SORBS3O60504 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SORBS3O60504 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SORBS3O60504 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.46■□□□□ 0.23
SORBS3O60504 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SORBS3O60504 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SORBS3O60504 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SORBS3O60504 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SORBS3O60504 AL136379.1-201ENST00000623471 2642 ntBASIC16.46■□□□□ 0.22
SORBS3O60504 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SORBS3O60504 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SORBS3O60504 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
SORBS3O60504 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.45■□□□□ 0.22
SORBS3O60504 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SORBS3O60504 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SORBS3O60504 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SORBS3O60504 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SORBS3O60504 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SORBS3O60504 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.45■□□□□ 0.22
SORBS3O60504 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.45■□□□□ 0.22
SORBS3O60504 RPL8P2-201ENST00000430538 502 ntBASIC16.45■□□□□ 0.22
SORBS3O60504 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.45■□□□□ 0.22
SORBS3O60504 AC234782.1-201ENST00000451950 919 ntBASIC16.45■□□□□ 0.22
SORBS3O60504 CFL1-214ENST00000534769 758 ntTSL 2 BASIC16.45■□□□□ 0.22
SORBS3O60504 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
SORBS3O60504 MIR4706-201ENST00000582134 82 ntBASIC16.45■□□□□ 0.22
SORBS3O60504 RN7SL190P-201ENST00000582519 257 ntBASIC16.45■□□□□ 0.22
SORBS3O60504 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.45■□□□□ 0.22
SORBS3O60504 AP000346.4-201ENST00000614827 381 ntBASIC16.45■□□□□ 0.22
SORBS3O60504 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SORBS3O60504 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SORBS3O60504 CAP2P1-201ENST00000557743 1390 ntBASIC16.45■□□□□ 0.22
SORBS3O60504 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SORBS3O60504 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SORBS3O60504 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.45■□□□□ 0.22
SORBS3O60504 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SORBS3O60504 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.45■□□□□ 0.22
SORBS3O60504 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
SORBS3O60504 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SORBS3O60504 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SORBS3O60504 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SORBS3O60504 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.45■□□□□ 0.22
SORBS3O60504 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SORBS3O60504 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
SORBS3O60504 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SORBS3O60504 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SORBS3O60504 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SORBS3O60504 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SORBS3O60504 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.45■□□□□ 0.22
SORBS3O60504 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.45■□□□□ 0.22
SORBS3O60504 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SORBS3O60504 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC16.45■□□□□ 0.22
SORBS3O60504 TBC1D3J-201ENST00000620719 1426 ntBASIC16.45■□□□□ 0.22
SORBS3O60504 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SORBS3O60504 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SORBS3O60504 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SORBS3O60504 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms